Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ytgA
Identifier: 15673873
GI number: 15673873
Start: 1960029
End: 1960589
Strand: Reverse
Name: ytgA
Synonym: L143459
Alternate gene names: NA
Gene position: 1960589-1960029 (Counterclockwise)
Preceding gene: 15673874
Following gene: 15673872
Centisome position: 82.88
GC content: 28.52
Gene sequence:
>561_bases GTGTCAAAAGGAAAAAAATTTATTTTTATTTTGGCTGATTTATTCTTTCTCACCATTCTTATCCCCATATTATGGGATTA CTTTAATTATATGAATTTTCGTTGGGAGCTTATGCCCTCATCAGAAATTCCTTACATTGGGAATCATCTTTCCCAATATA TATTTATCAGCTCTTCAATTTTAGGAGCATTATTGTTAATTTGTTTGCTGATTCTTATTTTTTATCCAAAAACTTATCAG GAAGTTCTACTAGATGATAAAACAGGAAATCTAACTTTAAAAGTTTCAGCAATCGAAGGATTGGTCAGAGAAATTGTTAG TAACAACGGTTATATCAGAAATCCAAAAATCAATGTGACTTTATATCAAGCCAAAATAAAAATTGATGTTAAAGGAGAAA TTATTCCCAGAGTTGAGATTGTCGAAAAAACAAAAGAAATTGAGCAAGAAATTAAAGAAAGTATCCAAAATTTCTTTGGT ATAAATTATGACTTAAAATTAAAAATAAAAGTTAGCTCACTTGCTGAAAATAAAAGTTCGACAAGTCGTCGTGTAGAATA A
Upstream 100 bases:
>100_bases TATCCCTTCTATTGTTGGTGCTGTCATCGTTGTTGCTGTCGTTTCATTCTTCTTAGGTAGAGCTAACAACTAGATAAAGC AGCAAAAGAGAGGAGGTATC
Downstream 100 bases:
>100_bases GGAGGTGGAAATGAATCTTTTAGAAAGATATCGCTATCCGATAATTGGAGGAATAGTAGGTTTAATTATAGCTATTTGTA TCTTCACAATCGGATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSKGKKFIFILADLFFLTILIPILWDYFNYMNFRWELMPSSEIPYIGNHLSQYIFISSSILGALLLICLLILIFYPKTYQ EVLLDDKTGNLTLKVSAIEGLVREIVSNNGYIRNPKINVTLYQAKIKIDVKGEIIPRVEIVEKTKEIEQEIKESIQNFFG INYDLKLKIKVSSLAENKSSTSRRVE
Sequences:
>Translated_186_residues MSKGKKFIFILADLFFLTILIPILWDYFNYMNFRWELMPSSEIPYIGNHLSQYIFISSSILGALLLICLLILIFYPKTYQ EVLLDDKTGNLTLKVSAIEGLVREIVSNNGYIRNPKINVTLYQAKIKIDVKGEIIPRVEIVEKTKEIEQEIKESIQNFFG INYDLKLKIKVSSLAENKSSTSRRVE >Mature_185_residues SKGKKFIFILADLFFLTILIPILWDYFNYMNFRWELMPSSEIPYIGNHLSQYIFISSSILGALLLICLLILIFYPKTYQE VLLDDKTGNLTLKVSAIEGLVREIVSNNGYIRNPKINVTLYQAKIKIDVKGEIIPRVEIVEKTKEIEQEIKESIQNFFGI NYDLKLKIKVSSLAENKSSTSRRVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21533; Mature: 21401
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGKKFIFILADLFFLTILIPILWDYFNYMNFRWELMPSSEIPYIGNHLSQYIFISSSI CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHH LGALLLICLLILIFYPKTYQEVLLDDKTGNLTLKVSAIEGLVREIVSNNGYIRNPKINVT HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCEEECCEEEEE LYQAKIKIDVKGEIIPRVEIVEKTKEIEQEIKESIQNFFGINYDLKLKIKVSSLAENKSS EEEEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCC TSRRVE CCCCCC >Mature Secondary Structure SKGKKFIFILADLFFLTILIPILWDYFNYMNFRWELMPSSEIPYIGNHLSQYIFISSSI CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHH LGALLLICLLILIFYPKTYQEVLLDDKTGNLTLKVSAIEGLVREIVSNNGYIRNPKINVT HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCEEECCEEEEE LYQAKIKIDVKGEIIPRVEIVEKTKEIEQEIKESIQNFFGINYDLKLKIKVSSLAENKSS EEEEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCC TSRRVE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA