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The map label for this gene is ytaB

Identifier: 15673816

GI number: 15673816

Start: 1901638

End: 1902930

Strand: Reverse

Name: ytaB

Synonym: L84992

Alternate gene names: 15673816

Gene position: 1902930-1901638 (Counterclockwise)

Preceding gene: 15673817

Following gene: 15673814

Centisome position: 80.44

GC content: 31.63

Gene sequence:

>1293_bases
GTGATTTTAAATTTATTTATAATAGTTTTAATGATTTTTCTTACGGCATTTTTTGTTGCGGCTGAATTTTCGCTGGTAAA
AATACGTAAAAGTCGTTTAGAAACATTAGAAAAAGAAAATAATAAAAGGGCAAAATTAGCACTTAATATCGTCAATCACC
TTGATTCTTATTTAAGTGCCTGTCAACTTGGAATCACTTTGACTTCGTTAGCAATTGGGTGGGTAGGTGAAAGTACAATG
CATAGTATTTTAGCTCCCCTCTTGTCTTATGTTCCTCTACCTTCTGCGTTATTAGACAGCTTGTCTATTATTTTAGCCTT
TTTATTAATTACTTTTGTTCATGTGGTAATCGGAGAACTTATTCCAAAATCTTTAAGTATTACAAAAACTGAAGGAGTTG
TCTTAACGGTTGCTGCTCCGCTCCATTATTTTTATAAACTTACCTATCCTTTTGTGTGGTTATTAAATGCTTCAGCAAGT
TCAATTGGTAAATTGTTTAATTTAAGTTTGGCTACTGAAGGTGATGAAATCCATTCAGAAGAAGAGTTAATTTTAATTGC
TAATCAAAGTTTTATTAAAGGGGAAATCAACGAAAAAGAGTACGAATATCTCAATAATGTCTTTGAATTTGATGATTTGA
TAGCTAAGGATATCATGGTGTCGAGATTAGATATGGAGACGATTCCCGTTGATGTTTCGATTGAAGAAGCGTTAAAATTT
GCGATTAAAAAAGGGCACACTCGTTTCCCTATTATTGCTAAAACTAAAGATGATATTCTAGGCTATGTTACGCTTCAAAA
TTTGATTAAAGAGTATTTAACTGCTCCTGGTCAAGAAATAAAGAAAATCATGCAAGAACCTATTATATTTATTGATACTA
TTCCTGTAAAGTTATTACTCTCAGAGATGCAAAAAGAGCATAAACATTTTGCTATTTTATTGGACGAGTATGGTGGGACA
AGTGGACTTGTGACAATTGAGGATATTCTTGAAGAGTTAGTAGGTGATATTCAGGATGAAGAAGATCATGAGAAAGAATT
GGTAATAAAGCTTTCTCCGACTACTTATCAGGTAGATGGTAAATTGCTTTTATCTGAATTTGAAGAACTGTTTAATATTG
ATTTGGCTCAAAATAATTTAAGTAAAACGATTAGTGGGTTTATTACAAATTATTCACTAGAGCAAAATGAGCCACTTGAG
GTGGGTCAGACTTTCGAATTTGATAATTTGAAAATTACTATTATTGAAATGGATAAAATTACTCCTCATATTTTAGAAGT
TAAACGAGTGTAG

Upstream 100 bases:

>100_bases
GTTCTTTGAATTCAAGAAGTATTTTTTAAATATTAGTTTTAAGTATAGCAATCCTAAAAAGAAATTCGAGAAATAATAGA
GAGAAATTAAGGAAAAAATA

Downstream 100 bases:

>100_bases
ATTGTATTTGAGGTATAAAAAAACGGAGCTTTAAGAGGCTCCGCTTTTTTATTTTATTGACGAACGACGAGGACATCGCA
TGGTGCATTTTTGATAATGT

Product: YtaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSACQLGITLTSLAIGWVGESTM
HSILAPLLSYVPLPSALLDSLSIILAFLLITFVHVVIGELIPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASAS
SIGKLFNLSLATEGDEIHSEEELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALKF
AIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPGQEIKKIMQEPIIFIDTIPVKLLLSEMQKEHKHFAILLDEYGGT
SGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQVDGKLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLE
VGQTFEFDNLKITIIEMDKITPHILEVKRV

Sequences:

>Translated_430_residues
MILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSACQLGITLTSLAIGWVGESTM
HSILAPLLSYVPLPSALLDSLSIILAFLLITFVHVVIGELIPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASAS
SIGKLFNLSLATEGDEIHSEEELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALKF
AIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPGQEIKKIMQEPIIFIDTIPVKLLLSEMQKEHKHFAILLDEYGGT
SGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQVDGKLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLE
VGQTFEFDNLKITIIEMDKITPHILEVKRV
>Mature_430_residues
MILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSACQLGITLTSLAIGWVGESTM
HSILAPLLSYVPLPSALLDSLSIILAFLLITFVHVVIGELIPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASAS
SIGKLFNLSLATEGDEIHSEEELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALKF
AIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPGQEIKKIMQEPIIFIDTIPVKLLLSEMQKEHKHFAILLDEYGGT
SGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQVDGKLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLE
VGQTFEFDNLKITIIEMDKITPHILEVKRV

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=381, Percent_Identity=41.2073490813648, Blast_Score=314, Evalue=9e-86,
Organism=Escherichia coli, GI1790664, Length=393, Percent_Identity=25.1908396946565, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI145693175, Length=387, Percent_Identity=24.2894056847545, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786879, Length=216, Percent_Identity=31.0185185185185, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082033, Length=245, Percent_Identity=24.0816326530612, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48534; Mature: 48534

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
CQLGITLTSLAIGWVGESTMHSILAPLLSYVPLPSALLDSLSIILAFLLITFVHVVIGEL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASASSIGKLFNLSLATEGDEIHSE
CCCCCCEEECCCEEEEEEHHHHHHHHHHHHHEEEEECCHHHHHHHHEEEEECCCCCCCCC
EELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALKF
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHH
AIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPGQEIKKIMQEPIIFIDTIPVKLLL
HHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHHH
SEMQKEHKHFAILLDEYGGTSGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQVDG
HHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECH
KLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLEVGQTFEFDNLKITIIEMDKI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEECCC
TPHILEVKRV
CHHHHHCCCC
>Mature Secondary Structure
MILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
CQLGITLTSLAIGWVGESTMHSILAPLLSYVPLPSALLDSLSIILAFLLITFVHVVIGEL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASASSIGKLFNLSLATEGDEIHSE
CCCCCCEEECCCEEEEEEHHHHHHHHHHHHHEEEEECCHHHHHHHHEEEEECCCCCCCCC
EELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALKF
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHH
AIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPGQEIKKIMQEPIIFIDTIPVKLLL
HHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHHH
SEMQKEHKHFAILLDEYGGTSGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQVDG
HHHHHCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECH
KLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLEVGQTFEFDNLKITIIEMDKI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEECCC
TPHILEVKRV
CHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]