Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is gltP
Identifier: 15673779
GI number: 15673779
Start: 1855296
End: 1855982
Strand: Reverse
Name: gltP
Synonym: L38650
Alternate gene names: 15673779
Gene position: 1855982-1855296 (Counterclockwise)
Preceding gene: 15673780
Following gene: 15673778
Centisome position: 78.46
GC content: 39.01
Gene sequence:
>687_bases ATGAACTTTGATTTTTTACCGAAATATCTGCCCTATTTTAATGACGGGATGATTGTCACAATTTTGATTTCAGCTTTCGT GGTTTTGATTGGAACACTCTTAGGGATTGTCACAGCCCTTGCCAAGATTTCTAAAATTGCTCCTTTGCGCTGGTTGGCAA ATATCTATATTGAAATTTTCCGTGGAACACCAATGCTCGTTCAAATTATGCTTGGTTTTGGCTTAATGGGAAGTCTATCT TTACCAACCTTTCAAGTTGGGATTTTACAACAAGATTTGGGGCGCTTGATTCCAGGGATAATTGTAATCTCACTGAATTC GGGGGCTTATATGGCGGAAATTGTTCGGGCTGGAATTGAAGCTGTTCCTCTTGGTCAAAAAGAAGCCGCCTATTCATTAG GAATTCGGCCAAGACAAGCGATGGCAACCGTTATTTTACCTCAGGCTTTGAGAAACATTCTACCAGCCGTCGGCAATGAA TTTGTGACAATTATCAAGGACAGCTCGCTTCTTTATACAATTGGAGTAATGGAAGTTTTCAATGGTGCACAAACAGTAGC AAATTTGACTTATCAAACCATTAGCCCGATGTTATTTGTAGCTCTCTACTATTTTGTAGTCACTTTTGTTGTCAGTCGCT TACTTGTTTTATTTGAAAAGAAACTCGGGAAAGGATATGCAAAATAA
Upstream 100 bases:
>100_bases ATTATTATACATTAATTGTTGTATTTTTATACTTTTTATATTATAATTATGCTATTGTTTTTTTATAAAAATAGAAATTA TAAAACAGAAAAGAGAAAAT
Downstream 100 bases:
>100_bases TGAATGAATATTTAATCGAAATAAAAAATCTGCATAAATATTTTGGAAAAAATGAAGTCTTAAAAGGACTTGATATCCAA ATAAAAAAAGGTGAAGTTGT
Product: glutamate ABC transporter permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRGTPMLVQIMLGFGLMGSLS LPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNE FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK
Sequences:
>Translated_228_residues MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRGTPMLVQIMLGFGLMGSLS LPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNE FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK >Mature_228_residues MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRGTPMLVQIMLGFGLMGSLS LPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNE FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=39.3518518518519, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=33.7899543378995, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787030, Length=231, Percent_Identity=31.1688311688312, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI87082239, Length=219, Percent_Identity=31.9634703196347, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=31.651376146789, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=27.906976744186, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=27.6995305164319, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787087, Length=215, Percent_Identity=26.5116279069767, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994930, Length=223, Percent_Identity=31.8385650224215, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1786874, Length=226, Percent_Identity=27.4336283185841, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24969; Mature: 24969
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIF CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGTPMLVQIMLGFGLMGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCH AVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVF HCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH NGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNFDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIF CCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGTPMLVQIMLGFGLMGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCH AVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVF HCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH NGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]