Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yseA
Identifier: 15673763
GI number: 15673763
Start: 1840677
End: 1841246
Strand: Reverse
Name: yseA
Synonym: L24031
Alternate gene names: 15673763
Gene position: 1841246-1840677 (Counterclockwise)
Preceding gene: 15673770
Following gene: 15673762
Centisome position: 77.83
GC content: 35.44
Gene sequence:
>570_bases ATGACTAAGAATCAAAAAGTCAAAACATTAACGTATTCAGCCTTTATGACTGCATTTATTATTATTCTAGGATTTTTACC AGGAATACCAATTGGTTTTATTCCTGTCCCAATTATCTTGCAAAATATGGGAATAATGATGGCTGGGGGACTTCTTGGCC CCAAATATGGTACAATTTCGGTAGGAGCATTTCTTACCTTAGCTTTAATTGGCTTACCTGTTTTAACGGGTGGAAATGGC GGAGCAGCGAGCTTTTTAGGGCCTTCGGGAGGCTACCGAATGGCTTGGCTTTTTACACCATTTTTAATAGGTTTTTTCCT TAAGAAATTGCAAATTACAGCTTCAAAGAATTGGATTGGAGAATTAATCATTGTTTTAGTGTTTGGAGTTATTTTTGTTG ATCTAGTCGGAGCAATCTGGCTATCTATTCAATCTAATATTCCATTAATTACTTCGTTGATTTCTAATTTAGTTTTTATT CCTGGTGATTGTATCAAAGCCATTTTGACTGTTCTTATCGTGCGACGTCTTAGAAAAGAAGGAGGCTTTGAAATGTATTT TAGAAAGTGA
Upstream 100 bases:
>100_bases AACAGTTAACCTAAATTTGATTTTAGGGTTACTGTTTGATATGATATCAGTATAATAAAAAATTCTTTTATTGTAAAATA TAAAATCAGGAGTAGCAAAT
Downstream 100 bases:
>100_bases TAATTATGCGAACAACAAAACAATTTGTCTTGTTAAAACTTCTTCAACAAAAAGGAAACTGGGTTTCGGGTGATGAATTA GCTGAGGAGCTAAAGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTKNQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTISVGAFLTLALIGLPVLTGGNG GAASFLGPSGGYRMAWLFTPFLIGFFLKKLQITASKNWIGELIIVLVFGVIFVDLVGAIWLSIQSNIPLITSLISNLVFI PGDCIKAILTVLIVRRLRKEGGFEMYFRK
Sequences:
>Translated_189_residues MTKNQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTISVGAFLTLALIGLPVLTGGNG GAASFLGPSGGYRMAWLFTPFLIGFFLKKLQITASKNWIGELIIVLVFGVIFVDLVGAIWLSIQSNIPLITSLISNLVFI PGDCIKAILTVLIVRRLRKEGGFEMYFRK >Mature_188_residues TKNQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTISVGAFLTLALIGLPVLTGGNGG AASFLGPSGGYRMAWLFTPFLIGFFLKKLQITASKNWIGELIIVLVFGVIFVDLVGAIWLSIQSNIPLITSLISNLVFIP GDCIKAILTVLIVRRLRKEGGFEMYFRK
Specific function: Probable biotin transporter [H]
COG id: COG1268
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BioY family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003784 [H]
Pfam domain/function: PF02632 BioY [H]
EC number: NA
Molecular weight: Translated: 20428; Mature: 20297
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTIS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHH VGAFLTLALIGLPVLTGGNGGAASFLGPSGGYRMAWLFTPFLIGFFLKKLQITASKNWIG HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH ELIIVLVFGVIFVDLVGAIWLSIQSNIPLITSLISNLVFIPGDCIKAILTVLIVRRLRKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHC GGFEMYFRK CCCEEEECC >Mature Secondary Structure TKNQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTIS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHH VGAFLTLALIGLPVLTGGNGGAASFLGPSGGYRMAWLFTPFLIGFFLKKLQITASKNWIG HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH ELIIVLVFGVIFVDLVGAIWLSIQSNIPLITSLISNLVFIPGDCIKAILTVLIVRRLRKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHC GGFEMYFRK CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]