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The map label for this gene is atpC

Identifier: 15673745

GI number: 15673745

Start: 1822602

End: 1823027

Strand: Reverse

Name: atpC

Synonym: L5953

Alternate gene names: 15673745

Gene position: 1823027-1822602 (Counterclockwise)

Preceding gene: 15673746

Following gene: 15673744

Centisome position: 77.06

GC content: 38.03

Gene sequence:

>426_bases
ATGTCTGAAAACGTCATGACACTTCAAGTAATTACCCCTGCTGGTATGATTTACGATCACCATGCAAATTACATTACTGC
TCGAACTACGAATGGTGAAATTGGTATTTTGCCAAATATGATTTCAACGATTGCTGGACTTGAAATTGATGAACTTAAAG
TTCGTCGTCCAGATGATGAAACACATGTTGATTATATTGCAGTAAATGGTGGAATTATCGAAATAAAAGATAGTCTTGTA
ACAATTGTTGCAGACTCTGCAGAACGTAATCGTGATATTGATGTATCACGTGCGGAACGTGCAAAAATTCGAGCTGAAAA
AGCACTTGAAGTTGCTAAAGCTGAGAAGAAATCAGATGAAATAAATAGAGCGGAAGTAGCACTCCACCGAGCGCTTAACC
GGCTGAATGTTTCGTCTCATAGATAA

Upstream 100 bases:

>100_bases
TTGAATTGTAAAATTTGAGTGACTGTTAGAGTTTTGTTTTTAGAAAAGTATTTTTTATCTTTGTAATTTAAATTTTCATA
GAAAAAATTGGAGGAATCGA

Downstream 100 bases:

>100_bases
AAAGCACCTACGGGTGTTTTTTTATTTTAAGGGAATAAGATTGCAAAATAAAGACAAACATGTTAAAATTGATGGAGTTC
TTTAAATAAAATACTGCAAA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSENVMTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDETHVDYIAVNGGIIEIKDSLV
TIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEINRAEVALHRALNRLNVSSHR

Sequences:

>Translated_141_residues
MSENVMTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDETHVDYIAVNGGIIEIKDSLV
TIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEINRAEVALHRALNRLNVSSHR
>Mature_140_residues
SENVMTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDETHVDYIAVNGGIIEIKDSLVT
IVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEINRAEVALHRALNRLNVSSHR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_LACLA (Q9CES1)

Other databases:

- EMBL:   AF393838
- EMBL:   AE005176
- EMBL:   AB072443
- PIR:   C86845
- RefSeq:   NP_267919.1
- ProteinModelPortal:   Q9CES1
- SMR:   Q9CES1
- GeneID:   1115426
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L5953
- NMPDR:   fig|272623.1.peg.1807
- HOGENOM:   HBG663981
- OMA:   DHHAKFI
- ProtClustDB:   PRK00571
- BioCyc:   LLAC272623:L5953-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15670; Mature: 15539

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENVMTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDE
CCCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEECHHHHHHHHCCCCHHEEEECCCCC
THVDYIAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDE
CCEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
INRAEVALHRALNRLNVSSHR
CHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SENVMTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDE
CCCEEEEEEECCCCEEEECCCCEEEEEECCCCEEECHHHHHHHHCCCCHHEEEECCCCC
THVDYIAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDE
CCEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
INRAEVALHRALNRLNVSSHR
CHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471