Click here to switch to the map view.

The map label for this gene is tra981I

Identifier: 15673673

GI number: 15673673

Start: 1747150

End: 1747989

Strand: Reverse

Name: tra981I

Synonym: L0439

Alternate gene names: 15673673

Gene position: 1747989-1747150 (Counterclockwise)

Preceding gene: 15673674

Following gene: 30024051

Centisome position: 73.89

GC content: 36.19

Gene sequence:

>840_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATGTCAGACTAAGCTGTCAACTCCTTGATGTTCCTGAATCAAGTTATTA
TGAACGGATTAACCGACATCCATCTAAAACTCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTTCTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAACAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATCACAT
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAGGTTTGGTCAACCGACATTACTTATATTCCTACTC
AACAAGGATGGGCTTATCTCTCAACCATTATGGATCGTTATACTAAAAAAGTCATTGCTTGGGATTTGGGCAAGCGAATG
ACTGTAGAATTAGTGCAAAGAACTTTAAATAAGGCCATTAAATCACAAGACTATCCAGAAGCTGTTATTCTTCATTCTGA
CCAAGGAAGCCAGTATACGAGTCTAGAGTATGAAGAGTTGCTTAAGTATTATGGGATGACTCACTCTTTCAGTCGAAGGG
GATACCCTTATCATAATGCCAGTCTTGAATCTTGGCATGGACATTTAAAAAGAGAGTGGGTGTATCAATTTAAATATAAG
AACTTTGAAGAAGCCTATCAGAGTATTTTCTGGTACATCGAAGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGG
GTATCTTACACCTAATCAATTTGAAAAGGTAAGTGCTTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGTATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
AATAAATAGATTAAAATTCTACGTTTGTTACTCTAAAAACTTGACTTAACGTCAATGATCGATGAGTTCATTTGCGATAA
GATTTCTTTCTTCATCTATA

Product: transposase of IS981I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Sequences:

>Translated_279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
>Mature_278_residues
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMT
VELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKN
FEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=245, Percent_Identity=27.3469387755102, Blast_Score=108, Evalue=4e-24,
Organism=Escherichia coli, GI1788405, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1787263, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1786753, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1786570, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1786490, Length=274, Percent_Identity=31.3868613138686, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1789981, Length=230, Percent_Identity=33.9130434782609, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32971; Mature: 32840

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]