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The map label for this gene is amyY

Identifier: 15673661

GI number: 15673661

Start: 1732900

End: 1734474

Strand: Reverse

Name: amyY

Synonym: L128692

Alternate gene names: 15673661

Gene position: 1734474-1732900 (Counterclockwise)

Preceding gene: 15673662

Following gene: 15673660

Centisome position: 73.32

GC content: 37.71

Gene sequence:

>1575_bases
ATGAAAAATAAGCTTTTACTTCTGTTAGTAACTTTACTGGCGACGTGTGCTTTAAGTGCTTGTCAAAAAGCAAATTCAAA
AGATTCATCAGTAAAAAAAGCGGCTGTCAGCCAAAAGGTTGATAGGAGTTTGTATCGTAATTTTTATGAAATATTTACGA
GTTCATTTGCCGATTCAAATCATGATGGCGAAGGTGATTTAAATGGGGTCACGCAACATTTAGACTACTTGAATACTGGA
AAATCCAATTCTACAACGGATTTGAAAGTGCAAGGACTTTGGATGACACCGATTTTTGCTAGTCCTAGTTATCATGGCTA
TGATGTCACTAATTACGAAGAAATTAATCCCAAGTTTGGGACAATGGCTGATTTTGAAAATCTGATTGCTCAAGCTAAAA
AACGAGGAATTGCTGTGATTTTGGATATGCCATTTAACCACACGGCGACTGATAATATCTGGTTTCAAAAAGCACTATCT
GGCGACAAAAAATATGTGGATTATTATAATTGGTCAGATACAGCCGAAGAGGGTTATAGTTTAGCCAGCAACGGCAAATA
CTATGAGTCAGAGTTTGATAAATCGATGCCAGACCTCAATCTTGCTAATCCTGAGGTCAAAAAAGAAATTGCAAAAATTA
CGAAACTTTGGTTGGACAAAGGTGTTTCTGGTTTCCGTTTGGATGCTGTCGGTTTTTATTTCTCAAATGATGATAAAAAA
ACGACAGCTTTCACAAAATGGCTGACAGACACGGTCAAAAAGCAAAATCCAAAAGCTTATTTAGTGGGTGAAGTTTTTTC
AACGGCTTCGGCAATTGATGATATTTATCAGTCAGGTATTGATTCATTATTTGACTTTCCGAATGCTTTGCAATCGAGTT
CAAGTCCAATTAATTCAGCTTTAGTCTTAGGTGAAGGCTCTTTATTTGGTCAACAAATTGAAGCATGGGACCAAGAAATT
CATGCGGATAACCCGAAAGCCATTGACGCTCCTTTCTTGAGTAATCATGACACAGACCGATCTGCAACACTTTTAAGTTC
TTTATCCATGCAGAAAATGGCTGCTCAAACTTATCTTTTGATGCCGGGAAATCCATTTATTTACTACGGTGAGGAATTGG
GGCTGACAGGTTCTGGCATTGACCAAAATAAACGTTTGCCAATGCCTTGGAATGCTGCTGGGACAGATTCTCCCAAAGCA
GACATTTCTGTGCCAGGTGCGACAGAAATTGCCACAACTGACGGAGGCTCAGTAGCTCAACAAGAAGCCAATCCGAACTC
ACTGCTCAATTGGTACAAAAAAATTTTACGGGTCAAAGCAAAATATCCTGAAATTGCGACTGACAGATTGAAAAATATTT
CTGTCAGTGAAGAGAGCTTGTCTGTCATTAATTATGGAAAGGATTTGACTATTATCAATAATTTTTCCGATACAGAAAAT
GTGACAATGAAACTCCCAAAAAGCGTTGTTGGGACAAAAATCACTGACCAACTTTCTGTCAGTAGTTCTCAAGCAAAATT
AACTGATGGAAAATTGACAATTCCAGCTTACAGCACCGTTATTTTAAAAAAATAA

Upstream 100 bases:

>100_bases
TTGCCAGCAAATGTGATTGCAGTAGGTAATCCAGCACGAATTCTCCGCGAAATTACTGATTCTGACCGACTTTACTGGGA
AGAAAAAGAGAACGAATATT

Downstream 100 bases:

>100_bases
ATAAGTTCAGTTTAGGGACTTTAAAAATGAAAATGTAAAACTATGAAAAAAATAAAAACAAATGATTTTCACAAGATGGT
AGGTTATCAGATTTATCCAA

Product: alpha-amylase

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKNKLLLLLVTLLATCALSACQKANSKDSSVKKAAVSQKVDRSLYRNFYEIFTSSFADSNHDGEGDLNGVTQHLDYLNTG
KSNSTTDLKVQGLWMTPIFASPSYHGYDVTNYEEINPKFGTMADFENLIAQAKKRGIAVILDMPFNHTATDNIWFQKALS
GDKKYVDYYNWSDTAEEGYSLASNGKYYESEFDKSMPDLNLANPEVKKEIAKITKLWLDKGVSGFRLDAVGFYFSNDDKK
TTAFTKWLTDTVKKQNPKAYLVGEVFSTASAIDDIYQSGIDSLFDFPNALQSSSSPINSALVLGEGSLFGQQIEAWDQEI
HADNPKAIDAPFLSNHDTDRSATLLSSLSMQKMAAQTYLLMPGNPFIYYGEELGLTGSGIDQNKRLPMPWNAAGTDSPKA
DISVPGATEIATTDGGSVAQQEANPNSLLNWYKKILRVKAKYPEIATDRLKNISVSEESLSVINYGKDLTIINNFSDTEN
VTMKLPKSVVGTKITDQLSVSSSQAKLTDGKLTIPAYSTVILKK

Sequences:

>Translated_524_residues
MKNKLLLLLVTLLATCALSACQKANSKDSSVKKAAVSQKVDRSLYRNFYEIFTSSFADSNHDGEGDLNGVTQHLDYLNTG
KSNSTTDLKVQGLWMTPIFASPSYHGYDVTNYEEINPKFGTMADFENLIAQAKKRGIAVILDMPFNHTATDNIWFQKALS
GDKKYVDYYNWSDTAEEGYSLASNGKYYESEFDKSMPDLNLANPEVKKEIAKITKLWLDKGVSGFRLDAVGFYFSNDDKK
TTAFTKWLTDTVKKQNPKAYLVGEVFSTASAIDDIYQSGIDSLFDFPNALQSSSSPINSALVLGEGSLFGQQIEAWDQEI
HADNPKAIDAPFLSNHDTDRSATLLSSLSMQKMAAQTYLLMPGNPFIYYGEELGLTGSGIDQNKRLPMPWNAAGTDSPKA
DISVPGATEIATTDGGSVAQQEANPNSLLNWYKKILRVKAKYPEIATDRLKNISVSEESLSVINYGKDLTIINNFSDTEN
VTMKLPKSVVGTKITDQLSVSSSQAKLTDGKLTIPAYSTVILKK
>Mature_524_residues
MKNKLLLLLVTLLATCALSACQKANSKDSSVKKAAVSQKVDRSLYRNFYEIFTSSFADSNHDGEGDLNGVTQHLDYLNTG
KSNSTTDLKVQGLWMTPIFASPSYHGYDVTNYEEINPKFGTMADFENLIAQAKKRGIAVILDMPFNHTATDNIWFQKALS
GDKKYVDYYNWSDTAEEGYSLASNGKYYESEFDKSMPDLNLANPEVKKEIAKITKLWLDKGVSGFRLDAVGFYFSNDDKK
TTAFTKWLTDTVKKQNPKAYLVGEVFSTASAIDDIYQSGIDSLFDFPNALQSSSSPINSALVLGEGSLFGQQIEAWDQEI
HADNPKAIDAPFLSNHDTDRSATLLSSLSMQKMAAQTYLLMPGNPFIYYGEELGLTGSGIDQNKRLPMPWNAAGTDSPKA
DISVPGATEIATTDGGSVAQQEANPNSLLNWYKKILRVKAKYPEIATDRLKNISVSEESLSVINYGKDLTIINNFSDTEN
VTMKLPKSVVGTKITDQLSVSSSQAKLTDGKLTIPAYSTVILKK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=537, Percent_Identity=27.7467411545624, Blast_Score=154, Evalue=2e-37,
Organism=Escherichia coli, GI1790687, Length=371, Percent_Identity=33.4231805929919, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1786604, Length=518, Percent_Identity=24.5173745173745, Blast_Score=118, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI32565753, Length=444, Percent_Identity=23.8738738738739, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25147709, Length=468, Percent_Identity=22.2222222222222, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6322245, Length=510, Percent_Identity=25.4901960784314, Blast_Score=129, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6321726, Length=502, Percent_Identity=23.5059760956175, Blast_Score=114, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6322241, Length=502, Percent_Identity=23.9043824701195, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6322021, Length=502, Percent_Identity=23.9043824701195, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324416, Length=501, Percent_Identity=22.9540918163673, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321731, Length=208, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6319776, Length=208, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=4e-25,
Organism=Drosophila melanogaster, GI45549022, Length=518, Percent_Identity=30.6949806949807, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI221330053, Length=443, Percent_Identity=28.8939051918736, Blast_Score=178, Evalue=9e-45,
Organism=Drosophila melanogaster, GI24586593, Length=561, Percent_Identity=26.7379679144385, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24586587, Length=563, Percent_Identity=26.1101243339254, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24583747, Length=435, Percent_Identity=27.816091954023, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24583749, Length=388, Percent_Identity=28.8659793814433, Blast_Score=158, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24583745, Length=429, Percent_Identity=27.5058275058275, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24586599, Length=553, Percent_Identity=25.6781193490054, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24586591, Length=565, Percent_Identity=25.4867256637168, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24586597, Length=389, Percent_Identity=30.0771208226221, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24586589, Length=389, Percent_Identity=29.5629820051414, Blast_Score=142, Evalue=7e-34,
Organism=Drosophila melanogaster, GI281360393, Length=502, Percent_Identity=24.9003984063745, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 57708; Mature: 57708

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLLLLLVTLLATCALSACQKANSKDSSVKKAAVSQKVDRSLYRNFYEIFTSSFADSN
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDGEGDLNGVTQHLDYLNTGKSNSTTDLKVQGLWMTPIFASPSYHGYDVTNYEEINPKFG
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCCC
TMADFENLIAQAKKRGIAVILDMPFNHTATDNIWFQKALSGDKKYVDYYNWSDTAEEGYS
CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHCCC
LASNGKYYESEFDKSMPDLNLANPEVKKEIAKITKLWLDKGVSGFRLDAVGFYFSNDDKK
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCH
TTAFTKWLTDTVKKQNPKAYLVGEVFSTASAIDDIYQSGIDSLFDFPNALQSSSSPINSA
HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCE
LVLGEGSLFGQQIEAWDQEIHADNPKAIDAPFLSNHDTDRSATLLSSLSMQKMAAQTYLL
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE
MPGNPFIYYGEELGLTGSGIDQNKRLPMPWNAAGTDSPKADISVPGATEIATTDGGSVAQ
ECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHH
QEANPNSLLNWYKKILRVKAKYPEIATDRLKNISVSEESLSVINYGKDLTIINNFSDTEN
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCC
VTMKLPKSVVGTKITDQLSVSSSQAKLTDGKLTIPAYSTVILKK
EEEECCHHHHCCCCHHHHCCCCCCCEECCCEEECCCEEEEEEEC
>Mature Secondary Structure
MKNKLLLLLVTLLATCALSACQKANSKDSSVKKAAVSQKVDRSLYRNFYEIFTSSFADSN
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDGEGDLNGVTQHLDYLNTGKSNSTTDLKVQGLWMTPIFASPSYHGYDVTNYEEINPKFG
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCHHCCCCCC
TMADFENLIAQAKKRGIAVILDMPFNHTATDNIWFQKALSGDKKYVDYYNWSDTAEEGYS
CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHCCC
LASNGKYYESEFDKSMPDLNLANPEVKKEIAKITKLWLDKGVSGFRLDAVGFYFSNDDKK
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCH
TTAFTKWLTDTVKKQNPKAYLVGEVFSTASAIDDIYQSGIDSLFDFPNALQSSSSPINSA
HHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCE
LVLGEGSLFGQQIEAWDQEIHADNPKAIDAPFLSNHDTDRSATLLSSLSMQKMAAQTYLL
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE
MPGNPFIYYGEELGLTGSGIDQNKRLPMPWNAAGTDSPKADISVPGATEIATTDGGSVAQ
ECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHH
QEANPNSLLNWYKKILRVKAKYPEIATDRLKNISVSEESLSVINYGKDLTIINNFSDTEN
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCC
VTMKLPKSVVGTKITDQLSVSSSQAKLTDGKLTIPAYSTVILKK
EEEECCHHHHCCCCHHHHCCCCCCCEECCCEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2455281 [H]