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The map label for this gene is rpmE2

Identifier: 15673578

GI number: 15673578

Start: 1640277

End: 1640522

Strand: Reverse

Name: rpmE2

Synonym: L0425

Alternate gene names: 15673578

Gene position: 1640522-1640277 (Counterclockwise)

Preceding gene: 15673579

Following gene: 15673577

Centisome position: 69.35

GC content: 38.21

Gene sequence:

>246_bases
ATGAAACAAAATATCCATCCAAATTACCAACCAGTAGTCTTCATGGACACTACAACTGGTTTCAAATTTTTGACTGGTTC
AACTAAAGGTTCTAAAGAAACTGTTGAATGGGAAGACGGAAACACTTATCCATTGATCCGTGTTGAAATCTCTTCAGATT
CACATCCATTCTATACAGGTCGTCAAAAATTCCAAGCAGCGGACGGACGTATCGCTCGTTTCGAAAAGAAATACGGCAAA
CAATAA

Upstream 100 bases:

>100_bases
AATTTTAACTTGAAATTTATCTATAAATTTGATAGAATATTTAAGTATTTGTACAACTTTGGTTTGGCAAACAGTCCAAG
GCAGAAAGGAAATTCTAACG

Downstream 100 bases:

>100_bases
TAGAAATGGTCCTTCGACCATTTTTATTTTTACCTGTAAAAGTTGTCATTTGACAGCTTTTTATTATGAAAAAATATAGA
AATAAGATAAAATAAAGAAA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKQNIHPNYQPVVFMDTTTGFKFLTGSTKGSKETVEWEDGNTYPLIRVEISSDSHPFYTGRQKFQAADGRIARFEKKYGK
Q

Sequences:

>Translated_81_residues
MKQNIHPNYQPVVFMDTTTGFKFLTGSTKGSKETVEWEDGNTYPLIRVEISSDSHPFYTGRQKFQAADGRIARFEKKYGK
Q
>Mature_81_residues
MKQNIHPNYQPVVFMDTTTGFKFLTGSTKGSKETVEWEDGNTYPLIRVEISSDSHPFYTGRQKFQAADGRIARFEKKYGK
Q

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=46.25, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_LACLA (Q9CF85)

Other databases:

- EMBL:   AE005176
- PIR:   D86824
- RefSeq:   NP_267752.1
- ProteinModelPortal:   Q9CF85
- SMR:   Q9CF85
- GeneID:   1115256
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L0425
- NMPDR:   fig|272623.1.peg.1638
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- BioCyc:   LLAC272623:L0425-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9337; Mature: 9337

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNIHPNYQPVVFMDTTTGFKFLTGSTKGSKETVEWEDGNTYPLIRVEISSDSHPFYTG
CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCEECC
RQKFQAADGRIARFEKKYGKQ
CCEEECCCCCEEEEHHHHCCC
>Mature Secondary Structure
MKQNIHPNYQPVVFMDTTTGFKFLTGSTKGSKETVEWEDGNTYPLIRVEISSDSHPFYTG
CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCEECC
RQKFQAADGRIARFEKKYGKQ
CCEEECCCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471