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The map label for this gene is yphJ

Identifier: 15673518

GI number: 15673518

Start: 1579184

End: 1579492

Strand: Reverse

Name: yphJ

Synonym: L178933

Alternate gene names: 15673518

Gene position: 1579492-1579184 (Counterclockwise)

Preceding gene: 15673519

Following gene: 15673517

Centisome position: 66.77

GC content: 34.63

Gene sequence:

>309_bases
ATGGAAAAACAAACCGCAGGACATGAACAACTTGGAGAATTTGCCCCAAAATTTGCTGAATTAAATGATGATATTCTTTT
TGGAGAAGTCTGGAGTCGTGAAAAAGAACTTTCAGCACATGAACGTAGTGTCATTACGATTACTGCTTTGATTGCTGGTG
GAAATTTTGAACAATTAAATTTTCATATGGCAAAAGGAAAAGAAAACGGAATAAGTCAGGAAGAAATTTCAGAAATAATT
ACTCATCTGAGTTTTTATGTGGGGTGGCCAAAGGCTTGGTCGGCTTTTAATATTGCAAAAAAAATTTGA

Upstream 100 bases:

>100_bases
AAAATTTTAGACCGACAGTGATGCGCCTAAAATTTTTGAAGGAACTTGGAAAAAGCATAAGATAAAACACCTTGAGAATT
GAAGAAAATTGGAGGTTAAA

Downstream 100 bases:

>100_bases
GAATAAGAGGGGAAAGCTATGACAATTACGGTCAACATTTTGTACCAAGGTGAGGGGGAGAAGGCCCATCTCTTTGCTGA
CGAAATGGTCAGTTCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEKQTAGHEQLGEFAPKFAELNDDILFGEVWSREKELSAHERSVITITALIAGGNFEQLNFHMAKGKENGISQEEISEII
THLSFYVGWPKAWSAFNIAKKI

Sequences:

>Translated_102_residues
MEKQTAGHEQLGEFAPKFAELNDDILFGEVWSREKELSAHERSVITITALIAGGNFEQLNFHMAKGKENGISQEEISEII
THLSFYVGWPKAWSAFNIAKKI
>Mature_102_residues
MEKQTAGHEQLGEFAPKFAELNDDILFGEVWSREKELSAHERSVITITALIAGGNFEQLNFHMAKGKENGISQEEISEII
THLSFYVGWPKAWSAFNIAKKI

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 11507; Mature: 11507

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQTAGHEQLGEFAPKFAELNDDILFGEVWSREKELSAHERSVITITALIAGGNFEQLN
CCCCCCCHHHHHHHCHHHHCCCCCEEEHHHHCCHHHHHHHCCCEEEEEEEEECCCCHHHE
FHMAKGKENGISQEEISEIITHLSFYVGWPKAWSAFNIAKKI
EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEKQTAGHEQLGEFAPKFAELNDDILFGEVWSREKELSAHERSVITITALIAGGNFEQLN
CCCCCCCHHHHHHHCHHHHCCCCCEEEHHHHCCHHHHHHHCCCEEEEEEEEECCCCHHHE
FHMAKGKENGISQEEISEIITHLSFYVGWPKAWSAFNIAKKI
EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]