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The map label for this gene is ypgB

Identifier: 15673502

GI number: 15673502

Start: 1561372

End: 1562409

Strand: Reverse

Name: ypgB

Synonym: L161121

Alternate gene names: 15673502

Gene position: 1562409-1561372 (Counterclockwise)

Preceding gene: 15673504

Following gene: 15673501

Centisome position: 66.05

GC content: 37.96

Gene sequence:

>1038_bases
ATGACAAATACAAATAAAAAAACAATTCTTGTAACAGGTGGTTCTGGATATATTGCTATGTTTATCATGATTGCTTTATT
GAAAAAAGGCTATCGAGTACGGGCGACATTGCGGACGATGTCTCGACAAGAAGAAGTGAAAAAAATGATGGCACAAGGCG
GAATTTCAGATTTTACAGATTTAGATTTTGTACAAACTGATTTGACAAAAGAAGAAGGATGGAGTCAAGCCATGACTGGT
GTTGATTCTGTGATTCATGTGTCTTCACCAACACCTTTGCAACGTCCTGACGCTGATGATTTAATGGTGAAAATGGCTGT
AGATGGAGTGAAGTTTGTGATGAAAGCGGCCAAGGAAGCAGGAGTTGAACGAGTGGTTTTGACCTCAGCATCGGGAGCAG
TTTTAGCGGGGCATAAGGATCATCCAGAAATCTTCACAGAGAGAGATTGGACAAACCTTGATGCTCCAATTAATGCATAT
CAACGTTCTAAAACGATGGCGGAAATGGAGTTTTGGAAACTTGCAGAAGCTTATGGTATTGAAGGAGCATCGGTTTTACC
TACAGCTGTTATGGGTCCAATTCTTGGAAATGATTTTTCACATTCTAGTGCGGCTATAAAAAATATGTTTGAAGGTAAAA
TGCCCAGACTTTTAAATTTAGCATTTGATTATGTTGACGTTCGTGATGTTGCTGATTTACATTTGCTAGCTCTTGAGAAA
AAAGAAGCGATTGGTCAGCGTTTCATTGCAACTTCAGGCCAAAATATTACTTACAAAAAGCAAGCTGAGTTTTTGAAAAA
GGAATTTGGTACAAAAGCTAAAAAAGTATCTACTCAGGTAATTCCCGACTTTTTAGTTAAAATTTTAGCTCGATTTGATA
AAAGTTTGGCGATGCCAGCTACATTTTTGGGGCAAAACACAGCTTGTTCAAATGAAAAATCAGTTAAACTTTTAGGCTGG
AAACCACGTTCAGGTGAAGCAGCGATTATTCAAACGGCACAAACGATGTTGGATTTGGGAGTTATTAAAGTTGATTAA

Upstream 100 bases:

>100_bases
TTTCAAAGGCTTGTATTTTTTACACTTCTATCGTACAATAATTTTACATAAGTTTCAAGTGTAACAGATGTGAATTAAGA
AAAATAGAGGAAAAAATTAA

Downstream 100 bases:

>100_bases
GAAAATTATAGTTTTGAAAATTTTCTATTTCCGAACGTTGTAAGCTAAAAAAGACCAAAGTCAGACTTCTGGTCTTTTTC
TTCTCTCTAAAAAAGTCTAA

Product: oxidoreductase

Products: NA

Alternate protein names: DFR; Dihydrokaempferol 4-reductase [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTNTNKKTILVTGGSGYIAMFIMIALLKKGYRVRATLRTMSRQEEVKKMMAQGGISDFTDLDFVQTDLTKEEGWSQAMTG
VDSVIHVSSPTPLQRPDADDLMVKMAVDGVKFVMKAAKEAGVERVVLTSASGAVLAGHKDHPEIFTERDWTNLDAPINAY
QRSKTMAEMEFWKLAEAYGIEGASVLPTAVMGPILGNDFSHSSAAIKNMFEGKMPRLLNLAFDYVDVRDVADLHLLALEK
KEAIGQRFIATSGQNITYKKQAEFLKKEFGTKAKKVSTQVIPDFLVKILARFDKSLAMPATFLGQNTACSNEKSVKLLGW
KPRSGEAAIIQTAQTMLDLGVIKVD

Sequences:

>Translated_345_residues
MTNTNKKTILVTGGSGYIAMFIMIALLKKGYRVRATLRTMSRQEEVKKMMAQGGISDFTDLDFVQTDLTKEEGWSQAMTG
VDSVIHVSSPTPLQRPDADDLMVKMAVDGVKFVMKAAKEAGVERVVLTSASGAVLAGHKDHPEIFTERDWTNLDAPINAY
QRSKTMAEMEFWKLAEAYGIEGASVLPTAVMGPILGNDFSHSSAAIKNMFEGKMPRLLNLAFDYVDVRDVADLHLLALEK
KEAIGQRFIATSGQNITYKKQAEFLKKEFGTKAKKVSTQVIPDFLVKILARFDKSLAMPATFLGQNTACSNEKSVKLLGW
KPRSGEAAIIQTAQTMLDLGVIKVD
>Mature_344_residues
TNTNKKTILVTGGSGYIAMFIMIALLKKGYRVRATLRTMSRQEEVKKMMAQGGISDFTDLDFVQTDLTKEEGWSQAMTGV
DSVIHVSSPTPLQRPDADDLMVKMAVDGVKFVMKAAKEAGVERVVLTSASGAVLAGHKDHPEIFTERDWTNLDAPINAYQ
RSKTMAEMEFWKLAEAYGIEGASVLPTAVMGPILGNDFSHSSAAIKNMFEGKMPRLLNLAFDYVDVRDVADLHLLALEKK
EAIGQRFIATSGQNITYKKQAEFLKKEFGTKAKKVSTQVIPDFLVKILARFDKSLAMPATFLGQNTACSNEKSVKLLGWK
PRSGEAAIIQTAQTMLDLGVIKVD

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydroflavonol-4-reductase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71987463, Length=347, Percent_Identity=32.5648414985591, Blast_Score=178, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6324421, Length=361, Percent_Identity=29.6398891966759, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6321399, Length=364, Percent_Identity=26.9230769230769, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6321281, Length=361, Percent_Identity=25.4847645429363, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320750, Length=362, Percent_Identity=26.2430939226519, Blast_Score=95, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR017829
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =1.1.1.219 [H]

Molecular weight: Translated: 37936; Mature: 37805

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTNKKTILVTGGSGYIAMFIMIALLKKGYRVRATLRTMSRQEEVKKMMAQGGISDFTD
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
LDFVQTDLTKEEGWSQAMTGVDSVIHVSSPTPLQRPDADDLMVKMAVDGVKFVMKAAKEA
HHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVERVVLTSASGAVLAGHKDHPEIFTERDWTNLDAPINAYQRSKTMAEMEFWKLAEAYGI
CCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
EGASVLPTAVMGPILGNDFSHSSAAIKNMFEGKMPRLLNLAFDYVDVRDVADLHLLALEK
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KEAIGQRFIATSGQNITYKKQAEFLKKEFGTKAKKVSTQVIPDFLVKILARFDKSLAMPA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TFLGQNTACSNEKSVKLLGWKPRSGEAAIIQTAQTMLDLGVIKVD
HHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEC
>Mature Secondary Structure 
TNTNKKTILVTGGSGYIAMFIMIALLKKGYRVRATLRTMSRQEEVKKMMAQGGISDFTD
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
LDFVQTDLTKEEGWSQAMTGVDSVIHVSSPTPLQRPDADDLMVKMAVDGVKFVMKAAKEA
HHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVERVVLTSASGAVLAGHKDHPEIFTERDWTNLDAPINAYQRSKTMAEMEFWKLAEAYGI
CCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
EGASVLPTAVMGPILGNDFSHSSAAIKNMFEGKMPRLLNLAFDYVDVRDVADLHLLALEK
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KEAIGQRFIATSGQNITYKKQAEFLKKEFGTKAKKVSTQVIPDFLVKILARFDKSLAMPA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TFLGQNTACSNEKSVKLLGWKPRSGEAAIIQTAQTMLDLGVIKVD
HHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]