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The map label for this gene is ypaD

Identifier: 15673456

GI number: 15673456

Start: 1504317

End: 1504997

Strand: Reverse

Name: ypaD

Synonym: L104065

Alternate gene names: NA

Gene position: 1504997-1504317 (Counterclockwise)

Preceding gene: 15673457

Following gene: 15673455

Centisome position: 63.62

GC content: 33.48

Gene sequence:

>681_bases
ATGAAAAAACAAACAATGACAATAGATGAAAAATTAAATAGTGTCCGTGCGGGAGTCTTGGGTTCAAATGATGGAATTCT
TACAGTTGTTGGTGTGCTCTTTTCGGTTTCCGCAGCTTCTGGAAGTAGCTTTGCTTTACTGATTGCTAGTTTGGCAAATT
TAATTTCTGGTGCTTTTTCAATGGCTTCTGGTGAGTATGCAAGTGTCAGTTCTCAATCTGATAGTGAGAAAGTTGTGGTT
CAAGAAGAAAAAATATTATTGAAAAAAGATTTTAAAAATCAAAAAGCAGCAGTGAAAGAATTTTATATTGAAAAAGGAAT
CAGTCCGGAAACTTCAGCAGAAATTGCTAATGAATTACTTGCTCGAAAACCTTTGGAAACTGTTCTGTCAGTAAAATATG
ATATTGCTTTAGGACATTATATGAATCCTTGGCAAGCAGCAGGTTCATCATTAATTTCATTTACGATTGGTGGACTTTTT
CCTTTACTAACCATGATTTTAGTTAAGGGTGCTTGGCAATTTCCAGCAACAATTTTTGCAACAATGCTTGCAATGGCCTT
AACTGGAATGATTAGTGCTAAGCTTTCTGATGGCTTGGTAATTAAAGCAATTCTTAGAAATATTATTATTGGTTTACTAA
CAATTTTTATTCATTATTTTATTGGTCGGATTTTAGGTTAA

Upstream 100 bases:

>100_bases
CTGATAAAAAACATGCAACTTTTAGAAATATTATTGCTGGGATTCTAACGATGCTTGTTACTTATGTAGTGGGTTTGCTC
TTTAAACAAGGAGGTTTGTG

Downstream 100 bases:

>100_bases
TGAATTTAGGCTTAGTTAAAAGCTTTTGTTATAATTATAGATAGGACTGATAATTATTGAGAAAGAGGCTGACAAATGGA
TGATAATACTAAAGAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Related Integral Membrane Protein DUF; Transmembrane Protein; Mebrane Associated Protein DUF; Ypothetical Protein SMU.

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKKQTMTIDEKLNSVRAGVLGSNDGILTVVGVLFSVSAASGSSFALLIASLANLISGAFSMASGEYASVSSQSDSEKVVV
QEEKILLKKDFKNQKAAVKEFYIEKGISPETSAEIANELLARKPLETVLSVKYDIALGHYMNPWQAAGSSLISFTIGGLF
PLLTMILVKGAWQFPATIFATMLAMALTGMISAKLSDGLVIKAILRNIIIGLLTIFIHYFIGRILG

Sequences:

>Translated_226_residues
MKKQTMTIDEKLNSVRAGVLGSNDGILTVVGVLFSVSAASGSSFALLIASLANLISGAFSMASGEYASVSSQSDSEKVVV
QEEKILLKKDFKNQKAAVKEFYIEKGISPETSAEIANELLARKPLETVLSVKYDIALGHYMNPWQAAGSSLISFTIGGLF
PLLTMILVKGAWQFPATIFATMLAMALTGMISAKLSDGLVIKAILRNIIIGLLTIFIHYFIGRILG
>Mature_226_residues
MKKQTMTIDEKLNSVRAGVLGSNDGILTVVGVLFSVSAASGSSFALLIASLANLISGAFSMASGEYASVSSQSDSEKVVV
QEEKILLKKDFKNQKAAVKEFYIEKGISPETSAEIANELLARKPLETVLSVKYDIALGHYMNPWQAAGSSLISFTIGGLF
PLLTMILVKGAWQFPATIFATMLAMALTGMISAKLSDGLVIKAILRNIIIGLLTIFIHYFIGRILG

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24182; Mature: 24182

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQTMTIDEKLNSVRAGVLGSNDGILTVVGVLFSVSAASGSSFALLIASLANLISGAFS
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MASGEYASVSSQSDSEKVVVQEEKILLKKDFKNQKAAVKEFYIEKGISPETSAEIANELL
HCCCCHHCCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ARKPLETVLSVKYDIALGHYMNPWQAAGSSLISFTIGGLFPLLTMILVKGAWQFPATIFA
HHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TMLAMALTGMISAKLSDGLVIKAILRNIIIGLLTIFIHYFIGRILG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKQTMTIDEKLNSVRAGVLGSNDGILTVVGVLFSVSAASGSSFALLIASLANLISGAFS
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
MASGEYASVSSQSDSEKVVVQEEKILLKKDFKNQKAAVKEFYIEKGISPETSAEIANELL
HCCCCHHCCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ARKPLETVLSVKYDIALGHYMNPWQAAGSSLISFTIGGLFPLLTMILVKGAWQFPATIFA
HHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TMLAMALTGMISAKLSDGLVIKAILRNIIIGLLTIFIHYFIGRILG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA