Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi307
Identifier: 15673363
GI number: 15673363
Start: 1417152
End: 1418714
Strand: Reverse
Name: pi307
Synonym: L16899
Alternate gene names: NA
Gene position: 1418714-1417152 (Counterclockwise)
Preceding gene: 15673364
Following gene: 15673362
Centisome position: 59.97
GC content: 34.23
Gene sequence:
>1563_bases ATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATTTGAACAGCCTATTCAAATTAT GGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGATAACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAG TAAAATTAACCTATCAATATATGTATAAATCTCAATCAGGTTTTATTATGTTGACTCCTAATGATATATCCAAGGGAGAA TTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAATACTTCTAAACGAAAGTTTAGA ACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGATGATTCTACAGTTACAGATTTAGCTCGAGAAGTGAATAATA AGATTGATGATTTTACAAAATTATTATTTGAAAACATGCCACAAGTGTTGCGTAGTGAGTTAGATGATTTAAATGCTCAA ACTGAATCAAATAAGAGTAATATTGAGCTTAAAGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGAACT TAAAAATGAAGTAGAAGCATTTGGTATTAGTCCTGAAAATTTAGTTACTATAAAATCGCTATTAGACGCAATCGCAAGTA ACGCCAGTGAATCAGAAGTAGCCGAACTAATAAATTCAGTAAAGGTTTTAACAAGTAATATTTCTCTAATGAGTAACGGA GATTACTCCCCTAAAGCTAATCAAACGGATTTAGAAAGTTTACGGCATACTGTTAATAATCAATCGGCGACTGTTTCAAC AAAAGCTAATCAAACGGATTTGGATAACTTACAAGCAAAGGTAAATCAAGCTGAAACTGATGTCAAAACAGCAATAACAA AGGCTACCGAAGCGCAAGCGAACAGTTTACCACTTAATGGCAATGCGGTCAGTGCAAGTAAATTGGAAACAGCTAGAAAA CTTAGGGTAAATCTTCAAACTTCTGCATATCAAAATTTTGATGGGACTGCTGATGTAGATAATATTGGGATTGTAGGGGC ACTTCCTATTGCAAATGGAGGTACTGGCAATCCAAGCGCTTATGCTTATGGGTTGAATTGCAATATTAATACAACTGATT TTAGTTCTGGAATGAAGATTTATACTAGAGCTGTCAACACAAATCAAGCTAATATGTTTATATTGCAATCTGTATGGGCT AAAAATGCACCGTCAGTTGGTGTGTATGTAGTAATTTGTAGCGTTACAAAGTATAATGCTAATGGAAATATGAGTATGAC TGCTCTAGCAAATGGAACAATTTATACTGCGACAGTTCCTTATACTTATACTGAGCCAACTACAACTACTCAAGCCATTT ATACTACTACAGCTACACCAAATTGGGTTAAAGTTTTAAACGAAAATGGAAAAGGCACTGACTATGCACAACCGCACCCA GTTGGTTCAGTAGTCACAAATAACTCAAACTCATTATCTGGCTACACGACCGGAACATGGGAAAATATCGGTTCAGCAGT AGTTGGTTCAACAACAATATATTATTGGCAACGCACTGCATAA
Upstream 100 bases:
>100_bases AAATGGAAGCCAATAATAAGTGGGCTTGGGGCTTTATGCTTACTCTTGCCGTAACTGTTATTGGATATATAATTACTAAA ATACTTTAAAAGGAGTCCCA
Downstream 100 bases:
>100_bases AAATATAAAAAATAGGAGAAAAAACATGAAAACAATTGATAAAGGAACACTTACACGTACAATCTTACTTGTATTAGCGT TAGCTAACCAACTTTTAACA
Product: prophage pi3 protein 07
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQYMYKSQSGFIMLTPNDISKGE FTLIIPTEMTVSGLIKSNLILLNESLEQVIVSKNLTFISDDSTVTDLAREVNNKIDDFTKLLFENMPQVLRSELDDLNAQ TESNKSNIELKANLADMTSLQSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVAELINSVKVLTSNISLMSNG DYSPKANQTDLESLRHTVNNQSATVSTKANQTDLDNLQAKVNQAETDVKTAITKATEAQANSLPLNGNAVSASKLETARK LRVNLQTSAYQNFDGTADVDNIGIVGALPIANGGTGNPSAYAYGLNCNINTTDFSSGMKIYTRAVNTNQANMFILQSVWA KNAPSVGVYVVICSVTKYNANGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGKGTDYAQPHP VGSVVTNNSNSLSGYTTGTWENIGSAVVGSTTIYYWQRTA
Sequences:
>Translated_520_residues MSLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQYMYKSQSGFIMLTPNDISKGE FTLIIPTEMTVSGLIKSNLILLNESLEQVIVSKNLTFISDDSTVTDLAREVNNKIDDFTKLLFENMPQVLRSELDDLNAQ TESNKSNIELKANLADMTSLQSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVAELINSVKVLTSNISLMSNG DYSPKANQTDLESLRHTVNNQSATVSTKANQTDLDNLQAKVNQAETDVKTAITKATEAQANSLPLNGNAVSASKLETARK LRVNLQTSAYQNFDGTADVDNIGIVGALPIANGGTGNPSAYAYGLNCNINTTDFSSGMKIYTRAVNTNQANMFILQSVWA KNAPSVGVYVVICSVTKYNANGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGKGTDYAQPHP VGSVVTNNSNSLSGYTTGTWENIGSAVVGSTTIYYWQRTA >Mature_519_residues SLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQYMYKSQSGFIMLTPNDISKGEF TLIIPTEMTVSGLIKSNLILLNESLEQVIVSKNLTFISDDSTVTDLAREVNNKIDDFTKLLFENMPQVLRSELDDLNAQT ESNKSNIELKANLADMTSLQSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVAELINSVKVLTSNISLMSNGD YSPKANQTDLESLRHTVNNQSATVSTKANQTDLDNLQAKVNQAETDVKTAITKATEAQANSLPLNGNAVSASKLETARKL RVNLQTSAYQNFDGTADVDNIGIVGALPIANGGTGNPSAYAYGLNCNINTTDFSSGMKIYTRAVNTNQANMFILQSVWAK NAPSVGVYVVICSVTKYNANGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGKGTDYAQPHPV GSVVTNNSNSLSGYTTGTWENIGSAVVGSTTIYYWQRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56402; Mature: 56270
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQY CCCCCHHHHEEEHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCEEEECCCEEEEEEEE MYKSQSGFIMLTPNDISKGEFTLIIPTEMTVSGLIKSNLILLNESLEQVIVSKNLTFISD EEECCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHCCEEEEHHHHHHHHHHCCCEEEEC DSTVTDLAREVNNKIDDFTKLLFENMPQVLRSELDDLNAQTESNKSNIELKANLADMTSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHH QSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVAELINSVKVLTSNISLMSNG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECC DYSPKANQTDLESLRHTVNNQSATVSTKANQTDLDNLQAKVNQAETDVKTAITKATEAQA CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NSLPLNGNAVSASKLETARKLRVNLQTSAYQNFDGTADVDNIGIVGALPIANGGTGNPSA CCCCCCCCCCCHHHHHHHHHEEEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCE YAYGLNCNINTTDFSSGMKIYTRAVNTNQANMFILQSVWAKNAPSVGVYVVICSVTKYNA EEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECC NGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGKGTDYAQPHP CCCEEEEEEECCEEEEEEECEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC VGSVVTNNSNSLSGYTTGTWENIGSAVVGSTTIYYWQRTA CCEEEECCCCCCCCCCCCCHHHHCCHHCCCEEEEEEEECC >Mature Secondary Structure SLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQY CCCCHHHHEEEHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCEEEECCCEEEEEEEE MYKSQSGFIMLTPNDISKGEFTLIIPTEMTVSGLIKSNLILLNESLEQVIVSKNLTFISD EEECCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHCCEEEEHHHHHHHHHHCCCEEEEC DSTVTDLAREVNNKIDDFTKLLFENMPQVLRSELDDLNAQTESNKSNIELKANLADMTSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHH QSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVAELINSVKVLTSNISLMSNG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECC DYSPKANQTDLESLRHTVNNQSATVSTKANQTDLDNLQAKVNQAETDVKTAITKATEAQA CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NSLPLNGNAVSASKLETARKLRVNLQTSAYQNFDGTADVDNIGIVGALPIANGGTGNPSA CCCCCCCCCCCHHHHHHHHHEEEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCE YAYGLNCNINTTDFSSGMKIYTRAVNTNQANMFILQSVWAKNAPSVGVYVVICSVTKYNA EEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECC NGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGKGTDYAQPHP CCCEEEEEEECCEEEEEEECEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC VGSVVTNNSNSLSGYTTGTWENIGSAVVGSTTIYYWQRTA CCEEEECCCCCCCCCCCCCHHHHCCHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA