Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi305
Identifier: 15673361
GI number: 15673361
Start: 1416048
End: 1416827
Strand: Reverse
Name: pi305
Synonym: L15795
Alternate gene names: NA
Gene position: 1416827-1416048 (Counterclockwise)
Preceding gene: 15673362
Following gene: 15673359
Centisome position: 59.89
GC content: 40.9
Gene sequence:
>780_bases ATGTCAAGTATTGAAAATATGATTGCTTGGATGCAAGCACGAAAGGGTAAGGTAACTTACTCAATGACCTTGCGAATGGG TCCTAGAAGTTATGACTGCAGCTCGTCAGTATTCTTTGCAATGATTGCTGGAGGTTTTCTGTCAGCAGGTTCAATGGGTA ATACTGAAACCTTGTTTGGAATGTCAGGAACAAAACTGAAAGAAATCAGTCGAGGAGAAGTCCAGCGTGGCGATATCTTC ATTTCAGGTACTCCAGGAGGTTCAGCTGGTTCGGATGGACACACTGGTATTTTTCTAAGCAATGGCTCATTCATTCACTG CTCTTACACTCACAATGGAATTGCGGTTGATACGAATGATGCATACATGAGTACTCGCTTGCCACATCACTTTTATCGGA TTGTTGGTTCAGGTTCAGCAAATGCTGACAGCAAGCCTCAAATGGTTACATTAAATGTTGATGGTCAGTTTGGAAATGCG ACTGCTAAACGATTGCAAGAATACTTTGATACAGCTGGGAAAGATGGAGTAATCAGTCACCAGTACAAACAAACCTTTAA CCAAAATATTTATGCTGCTCAGTTTGATTCATCACTGACTGGTTCAAACGTGGTTAAAGCATTGCAAAGATTCTTAGGGA TCGGACAAGACGGACTGTTTGGCCAAGGTACAATTAAAGCTTTACAAAAGCACCTTGGAACCACACAAGACGGAACAATT AGCCCAGTTTCTGATTCTGTCAGAGAATTACAACGTCGATTAAATGCGAATAAATTATAA
Upstream 100 bases:
>100_bases AAAAAGGAACTGAACTAACTAAAAGTTTAAAAAATGGAGATAGTGTTCAAGTAGTTAAGGCATCTGATTCTGACCACGAA TTCACAGAAGGAGGCGAATA
Downstream 100 bases:
>100_bases AAATTAACCCTGACTTCGGTCAGGGCTTTTTTGTTAACAAATGTTACTGTTTTTCTTAAAATAAATTAGTATAATATCCT TATCATAAATGCTATTCCAA
Product: muramidase
Products: NA
Alternate protein names: Prophage LambdaSa2 Lysin; N-Acetylmuramoyl-L-Alanine Amidase; Endolysin Domain-Containing Protein; CHAP Domain Containing Protein; Cell Wall-Associated Hydrolase; Bacteriophage Endolysin; Prophage LambdaSa1 Lysin; Bacteriophage Peptidoglycan Hydrolase; Phage Lysin
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSSIENMIAWMQARKGKVTYSMTLRMGPRSYDCSSSVFFAMIAGGFLSAGSMGNTETLFGMSGTKLKEISRGEVQRGDIF ISGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTNDAYMSTRLPHHFYRIVGSGSANADSKPQMVTLNVDGQFGNA TAKRLQEYFDTAGKDGVISHQYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDGLFGQGTIKALQKHLGTTQDGTI SPVSDSVRELQRRLNANKL
Sequences:
>Translated_259_residues MSSIENMIAWMQARKGKVTYSMTLRMGPRSYDCSSSVFFAMIAGGFLSAGSMGNTETLFGMSGTKLKEISRGEVQRGDIF ISGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTNDAYMSTRLPHHFYRIVGSGSANADSKPQMVTLNVDGQFGNA TAKRLQEYFDTAGKDGVISHQYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDGLFGQGTIKALQKHLGTTQDGTI SPVSDSVRELQRRLNANKL >Mature_258_residues SSIENMIAWMQARKGKVTYSMTLRMGPRSYDCSSSVFFAMIAGGFLSAGSMGNTETLFGMSGTKLKEISRGEVQRGDIFI SGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTNDAYMSTRLPHHFYRIVGSGSANADSKPQMVTLNVDGQFGNAT AKRLQEYFDTAGKDGVISHQYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDGLFGQGTIKALQKHLGTTQDGTIS PVSDSVRELQRRLNANKL
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27898; Mature: 27767
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIENMIAWMQARKGKVTYSMTLRMGPRSYDCSSSVFFAMIAGGFLSAGSMGNTETLFG CCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEC MSGTKLKEISRGEVQRGDIFISGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTND CCCCHHHHHHCCCCEECCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCC AYMSTRLPHHFYRIVGSGSANADSKPQMVTLNVDGQFGNATAKRLQEYFDTAGKDGVISH CHHHHCCCHHHHHEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH QYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDGLFGQGTIKALQKHLGTTQDGTI HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC SPVSDSVRELQRRLNANKL CCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSIENMIAWMQARKGKVTYSMTLRMGPRSYDCSSSVFFAMIAGGFLSAGSMGNTETLFG CHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEC MSGTKLKEISRGEVQRGDIFISGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTND CCCCHHHHHHCCCCEECCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCC AYMSTRLPHHFYRIVGSGSANADSKPQMVTLNVDGQFGNATAKRLQEYFDTAGKDGVISH CHHHHCCCHHHHHEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH QYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDGLFGQGTIKALQKHLGTTQDGTI HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC SPVSDSVRELQRRLNANKL CCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA