Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yoaD
Identifier: 15673349
GI number: 15673349
Start: 1406014
End: 1406739
Strand: Reverse
Name: yoaD
Synonym: L6208
Alternate gene names: NA
Gene position: 1406739-1406014 (Counterclockwise)
Preceding gene: 15673350
Following gene: 15673348
Centisome position: 59.47
GC content: 31.4
Gene sequence:
>726_bases ATGATGGAAAATAGTTTAAATATCATTGAAAAAATGAATCCTAATCAAAAAATAAATTATGATCGTGTTTTTCAAAAAGT TCGTGAAAGTTGGGAAAGAGATTCTGTTCGTCCCAAAATTTTGCTTCATTCTTGTTGTGCCCCTTGTAGTACTTATTCAT TAGAATACCTTACGCAATCAGCCGATGTGACGATTTATTTTGCTAATTCAAATATTCATCCGTCAACTGAATATACAAGA AGAAAAATGGTTCAAGAACAATTTGTAAAAGATTTTAATGAACGGACAGGAAATAATGTTCAATTTATTGCTGCCGAATA TGAACCAAATGTCTTTTTACAAATGGTTCGTCAAAAACATTTAGAAAATGAACCTGAGGGTGGGAAACGTTGCACCTCTT GTTTTGAAATGCGATTGGATATAGTTGCTGAGAAGGCTTTAGAACTTGGTTTTGATTATTTTGGTAGTGCTTTGACTTTA TCACCAAAGAAGAATAGCCAATTAATTAATGAAATTGGTCTTGACATTCAAAAGATTTATGATGTGAATTATCTTCCAAG TGATTTTAAGAAGAATAATGGCTATAAACGTTCTGTAGAGATGTGTAAAGAATACGATGTTTATCGTCAATGTTATTGCG GATGTATTTTCGCGGCTAAAGCACAAGGGATTGATTTAAAAGAACAGAATCGAGAAGCTATTAAATTTATTAGAAATCAA TCATAA
Upstream 100 bases:
>100_bases AACAGATATAATAACCAATAGTGACCTCTTGAAAGAGGTCATTTTTTATTTCAAAATGTGATATAATAATTGACAGAAAT AGAGAGAATTTAAGGATATA
Downstream 100 bases:
>100_bases TCATAGATTTGTATTTAAAAAATAAGAAAATAACTTGACAAAAAAGCCCATTTTTAATAAAATGAGGGTAACTTAAATAT TCCAAAGGGGAGTAGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MMENSLNIIEKMNPNQKINYDRVFQKVRESWERDSVRPKILLHSCCAPCSTYSLEYLTQSADVTIYFANSNIHPSTEYTR RKMVQEQFVKDFNERTGNNVQFIAAEYEPNVFLQMVRQKHLENEPEGGKRCTSCFEMRLDIVAEKALELGFDYFGSALTL SPKKNSQLINEIGLDIQKIYDVNYLPSDFKKNNGYKRSVEMCKEYDVYRQCYCGCIFAAKAQGIDLKEQNREAIKFIRNQ S
Sequences:
>Translated_241_residues MMENSLNIIEKMNPNQKINYDRVFQKVRESWERDSVRPKILLHSCCAPCSTYSLEYLTQSADVTIYFANSNIHPSTEYTR RKMVQEQFVKDFNERTGNNVQFIAAEYEPNVFLQMVRQKHLENEPEGGKRCTSCFEMRLDIVAEKALELGFDYFGSALTL SPKKNSQLINEIGLDIQKIYDVNYLPSDFKKNNGYKRSVEMCKEYDVYRQCYCGCIFAAKAQGIDLKEQNREAIKFIRNQ S >Mature_241_residues MMENSLNIIEKMNPNQKINYDRVFQKVRESWERDSVRPKILLHSCCAPCSTYSLEYLTQSADVTIYFANSNIHPSTEYTR RKMVQEQFVKDFNERTGNNVQFIAAEYEPNVFLQMVRQKHLENEPEGGKRCTSCFEMRLDIVAEKALELGFDYFGSALTL SPKKNSQLINEIGLDIQKIYDVNYLPSDFKKNNGYKRSVEMCKEYDVYRQCYCGCIFAAKAQGIDLKEQNREAIKFIRNQ S
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 28166; Mature: 28166
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMENSLNIIEKMNPNQKINYDRVFQKVRESWERDSVRPKILLHSCCAPCSTYSLEYLTQS CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCC ADVTIYFANSNIHPSTEYTRRKMVQEQFVKDFNERTGNNVQFIAAEYEPNVFLQMVRQKH CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH LENEPEGGKRCTSCFEMRLDIVAEKALELGFDYFGSALTLSPKKNSQLINEIGLDIQKIY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHH DVNYLPSDFKKNNGYKRSVEMCKEYDVYRQCYCGCIFAAKAQGIDLKEQNREAIKFIRNQ CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC S C >Mature Secondary Structure MMENSLNIIEKMNPNQKINYDRVFQKVRESWERDSVRPKILLHSCCAPCSTYSLEYLTQS CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCC ADVTIYFANSNIHPSTEYTRRKMVQEQFVKDFNERTGNNVQFIAAEYEPNVFLQMVRQKH CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH LENEPEGGKRCTSCFEMRLDIVAEKALELGFDYFGSALTLSPKKNSQLINEIGLDIQKIY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHH DVNYLPSDFKKNNGYKRSVEMCKEYDVYRQCYCGCIFAAKAQGIDLKEQNREAIKFIRNQ CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]