Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ynhD
Identifier: 15673319
GI number: 15673319
Start: 1375967
End: 1376593
Strand: Reverse
Name: ynhD
Synonym: L175712
Alternate gene names: NA
Gene position: 1376593-1375967 (Counterclockwise)
Preceding gene: 15673326
Following gene: 15673318
Centisome position: 58.19
GC content: 31.26
Gene sequence:
>627_bases ATGCCAGTCAGTTTATTTATGAATCATCAGGACATGATGTTCGGTTATGGTCATCTAGGAATCGTGAATGTGATTTTTGG ATTAGTTCTCTTTTTCTTAATTATAAAAATGATTATCGGAATTAGTTTTATGCGAAAAAACCCCGATGAAAGAGAAGAAG GATATAAGGATAAAGGAATGAGCAAAAAAGAAAATATTGAACGTTACCACGAAGCAGGACTCTCAGATACGGATATTAAA ATTTTCCGTGAAAACTTGTCAGAAGCAAAAGAAAATATCAAAACTTGGGAAAAATTACTGAAAAAAGAAGATGATTTACA AGTTGTTGAATCAGTGACAGGTGGTTTAGAAGCCAGCAAACAAACGTTTAAATATATTGTTCAAAATCCACAAGAACTCA CAAAACAAAATGAGTTTCTATATAAAGACTTGCCAAACATGGTCAAATTGTCAGAGAAATTTATTGAGATGAAGAAACAG TCAGTAAGAACAGAAGAAATCAATCGTGATTTAGATGAAACCTTACTTTTGATAAAAACACTCTCACATTCAATTTCTAA AAACTACCATGAAATTTTGATGGACGATGTCAATGTCATCAAACATCAAGTTGATTTTGACAAATAA
Upstream 100 bases:
>100_bases ATTATGATAAAATAGAAATATATCCGAAAGGTTATTCTTAAAAATGAAATTTAAAAATTAGAAACTTGTGAGAACAGGAC GCAAGCGGGAGGAAAAAAAT
Downstream 100 bases:
>100_bases TTTTACTGACAGACGTTTTAAAAATTCTTGTCAGTAAAACCGATGATTCTGTCAGTAAAAAAACAAATATTCCTGTCAAT TTTGGCAGGAATCATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGMSKKENIERYHEAGLSDTDIK IFRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASKQTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQ SVRTEEINRDLDETLLLIKTLSHSISKNYHEILMDDVNVIKHQVDFDK
Sequences:
>Translated_208_residues MPVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGMSKKENIERYHEAGLSDTDIK IFRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASKQTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQ SVRTEEINRDLDETLLLIKTLSHSISKNYHEILMDDVNVIKHQVDFDK >Mature_207_residues PVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGMSKKENIERYHEAGLSDTDIKI FRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASKQTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQS VRTEEINRDLDETLLLIKTLSHSISKNYHEILMDDVNVIKHQVDFDK
Specific function: Unknown
COG id: COG4915
COG function: function code R; 5-bromo-4-chloroindolyl phosphate hydrolysis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24396; Mature: 24264
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGM CCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCC SKKENIERYHEAGLSDTDIKIFRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASK CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH QTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQSVRTEEINRDLDETLLLIKT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LSHSISKNYHEILMDDVNVIKHQVDFDK HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVSLFMNHQDMMFGYGHLGIVNVIFGLVLFFLIIKMIIGISFMRKNPDEREEGYKDKGM CCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCC SKKENIERYHEAGLSDTDIKIFRENLSEAKENIKTWEKLLKKEDDLQVVESVTGGLEASK CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH QTFKYIVQNPQELTKQNEFLYKDLPNMVKLSEKFIEMKKQSVRTEEINRDLDETLLLIKT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LSHSISKNYHEILMDDVNVIKHQVDFDK HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA