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The map label for this gene is ynfH

Identifier: 15673307

GI number: 15673307

Start: 1359619

End: 1361796

Strand: Reverse

Name: ynfH

Synonym: L159364

Alternate gene names: NA

Gene position: 1361796-1359619 (Counterclockwise)

Preceding gene: 15673308

Following gene: 15673306

Centisome position: 57.57

GC content: 42.33

Gene sequence:

>2178_bases
ATGGAAATGCAGAAACAAAAACCACCACGTAAGAAAAATAAAATTATTACTAAACGTAAAGTATTATCAGCAACGATGTC
AGGAACTCTATTAATGACATCGGTAGTTATTCCAACAGCTTACAGCCTTCTTTCTAATCAGATCACAGCACAAGCAGCTG
CCTTGAATATTGACCTATTGCAAAATATCACTTCAAGTAATAATAGTGGTACAAGTACAACTAATCGATGGACCAGTAAT
TCAGGGAGCCACAATGTAGATTTTACCATCTCTGGTGGTGCTTTAGCGAATATCTCTGTACTACCAGGAACAAGATATGC
TACTTTGGTGGTTCCGCCAGAGCTACGAGGTTATGTGGCTGCTACCGGGAATACTTCAGTCTCTACCAATATCACCATTG
ATTTCAACAAAGTTGCCCTCATTACTGCTATTGTGAATGCTGGAGATACATTGATATCTGATATTGCTCCGCTCTTGAGT
AGTAATCCTTTGGTTACTCTTAACTTAGCTCAAGTGACTCAACAGCTCAACCTTTTACGAGGAATTCAAGATATTGGCGG
TGGAACATTTACATCTACAACGACATTAAGTAATGAGAATGCACTACTTAGTGCACCATTAGATGATGGAGTAGGACATA
TTTTATCTCTGAACGTGAAAACGATTCTTCAAAACCTGGAAACCGCTGTTAATAATCTCAATGCAACAGGTACAGGGGCT
ATAGCGGTCAATGCTGCTTTAACTCCTTTAAAGTTGGTTTTAAATGGAGCTATCGATGATGTTTTATTACCATTAACTAA
TGGAACAGGTAATATTTTAGATTTATTGTTAAATGTCTCAGCTCTCGGTGATACAACAATTACTATTCCTACCAAAATAA
CAGCACCAACAACTATCCAAAGTAATATTGATGCAAATTTTGTAGGATCCGCAGTTCAGACAACTTTACTGGATGTTAAC
ATTCTGAGTGGTGCAAATGGGATTTCCTATGTTTATTTAGCTGGCGATGTTAATTTAACGCTTGTCGCGCCAACTGGTGA
TTTGACAGCTACGACTTCAGCGGTTGGTGCTGCGGATGCGACAGCGACTCTTCCGACAACTTTGAATAATAGTGCTGGTG
CAGATATACCAGTAACTTCTAAAATCACGAATGCTTCAGGTACAGCAGTAACGAATGGTCAATTGACAGCTGGCACCTAC
ACAGTCACCTATTCAGCCACAGGTTATGACGATGTGACTCAAAGTTTAGTCGTTAGTGACCCAGCAGATACGACCGCCCC
ATCTGCCCCAGTTGTCAATGATGTGACGGGGAACAGCACGAATGGCTACACTGTGACCGGGACAGCCGAACCAGGTTCGA
CAGTCACAGTCAAAGATGAGACAGGAACACCGATAGGTACAGGTACCGCTGGTGAAACTGGTGATTATAGTCTGACACTT
CCAGGTAGTGTTGGTCCTAACGCTCCGTTGACTGTAACCGCGACTGATGAAGCTGGAAATGAGAGTGATCCAACCTCAGC
GACTACTCCAGCAGATCCAGTGAGCCCCGTTCTTGTTGCCCCAACTGGTAACTTGACTGCAACAACTTCAGCCGCTGGTG
CCGCAGATGCGAGCGCGACTCTTCCGACAACTTTGAAAAATAGTGCTGGTGCAGATATACCAGTAACTTCTAAAATCACC
AATAATTCAGGAATAGCAGTAACGAATGGGCAACTATCAAAGGGAACCTATAAGGTGATTTATTCGGCATCAGGTTATAA
AGATGTAACCCAAAACTTAGTCGTTAGTGATCCAGCAGACACAACTGCTCCAGAAGCTCCAAGTGTTGATACAATAACTG
GGAACACTGATACAGGTTATACAGTAGGTGGTAAAGGAGAACCAGGTTCCACAATAACAATTAAAAACCCAGCAACTGGT
GAGGTTTTGGGAACCACTATAGTGGATAAAGATGGAAACTATAGCATCAAACTTCCGACGGGGGTTAAACCGGGTACTCA
ACTTTCGGCTACCGCAACTGATGCTGCAGGAAATGTAAGTGATTCAACAGACTTTATTATTCCGGCCTTGACTTCTGGAA
TGGCAATAGGTAATAGTGGGATAATATGGGTAGTAAGTATTTCTCAAGTGGTAAATTACCAGCAACAAATGGTGCAGACA
CTGGCTGGCTTGGTGTAA

Upstream 100 bases:

>100_bases
AGTGTATAGAATAGATTACTTAATACATGTTGCTTAAAAATATTTTATGCCGGATCAACATAAGATATTTTTCCAAACGA
TTTAGGAGGAATTTGACAAA

Downstream 100 bases:

>100_bases
TTGGAACAGTCATTCTATCTCTACTTGGTAGTCTATTGTTCTGGCGTAAAAATAAAAAGGAGGATGAAAGCTAACACCAA
TAAAATTTTTCAAACAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Large Repetitive Protein; Cell Wall-Associated Protease; Biofilm-Associated Protein; Adhesin For Cattle Intestine Colonization; Glycoprotein; Biofilm Associated Protein A

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MEMQKQKPPRKKNKIITKRKVLSATMSGTLLMTSVVIPTAYSLLSNQITAQAAALNIDLLQNITSSNNSGTSTTNRWTSN
SGSHNVDFTISGGALANISVLPGTRYATLVVPPELRGYVAATGNTSVSTNITIDFNKVALITAIVNAGDTLISDIAPLLS
SNPLVTLNLAQVTQQLNLLRGIQDIGGGTFTSTTTLSNENALLSAPLDDGVGHILSLNVKTILQNLETAVNNLNATGTGA
IAVNAALTPLKLVLNGAIDDVLLPLTNGTGNILDLLLNVSALGDTTITIPTKITAPTTIQSNIDANFVGSAVQTTLLDVN
ILSGANGISYVYLAGDVNLTLVAPTGDLTATTSAVGAADATATLPTTLNNSAGADIPVTSKITNASGTAVTNGQLTAGTY
TVTYSATGYDDVTQSLVVSDPADTTAPSAPVVNDVTGNSTNGYTVTGTAEPGSTVTVKDETGTPIGTGTAGETGDYSLTL
PGSVGPNAPLTVTATDEAGNESDPTSATTPADPVSPVLVAPTGNLTATTSAAGAADASATLPTTLKNSAGADIPVTSKIT
NNSGIAVTNGQLSKGTYKVIYSASGYKDVTQNLVVSDPADTTAPEAPSVDTITGNTDTGYTVGGKGEPGSTITIKNPATG
EVLGTTIVDKDGNYSIKLPTGVKPGTQLSATATDAAGNVSDSTDFIIPALTSGMAIGNSGIIWVVSISQVVNYQQQMVQT
LAGLV

Sequences:

>Translated_725_residues
MEMQKQKPPRKKNKIITKRKVLSATMSGTLLMTSVVIPTAYSLLSNQITAQAAALNIDLLQNITSSNNSGTSTTNRWTSN
SGSHNVDFTISGGALANISVLPGTRYATLVVPPELRGYVAATGNTSVSTNITIDFNKVALITAIVNAGDTLISDIAPLLS
SNPLVTLNLAQVTQQLNLLRGIQDIGGGTFTSTTTLSNENALLSAPLDDGVGHILSLNVKTILQNLETAVNNLNATGTGA
IAVNAALTPLKLVLNGAIDDVLLPLTNGTGNILDLLLNVSALGDTTITIPTKITAPTTIQSNIDANFVGSAVQTTLLDVN
ILSGANGISYVYLAGDVNLTLVAPTGDLTATTSAVGAADATATLPTTLNNSAGADIPVTSKITNASGTAVTNGQLTAGTY
TVTYSATGYDDVTQSLVVSDPADTTAPSAPVVNDVTGNSTNGYTVTGTAEPGSTVTVKDETGTPIGTGTAGETGDYSLTL
PGSVGPNAPLTVTATDEAGNESDPTSATTPADPVSPVLVAPTGNLTATTSAAGAADASATLPTTLKNSAGADIPVTSKIT
NNSGIAVTNGQLSKGTYKVIYSASGYKDVTQNLVVSDPADTTAPEAPSVDTITGNTDTGYTVGGKGEPGSTITIKNPATG
EVLGTTIVDKDGNYSIKLPTGVKPGTQLSATATDAAGNVSDSTDFIIPALTSGMAIGNSGIIWVVSISQVVNYQQQMVQT
LAGLV
>Mature_725_residues
MEMQKQKPPRKKNKIITKRKVLSATMSGTLLMTSVVIPTAYSLLSNQITAQAAALNIDLLQNITSSNNSGTSTTNRWTSN
SGSHNVDFTISGGALANISVLPGTRYATLVVPPELRGYVAATGNTSVSTNITIDFNKVALITAIVNAGDTLISDIAPLLS
SNPLVTLNLAQVTQQLNLLRGIQDIGGGTFTSTTTLSNENALLSAPLDDGVGHILSLNVKTILQNLETAVNNLNATGTGA
IAVNAALTPLKLVLNGAIDDVLLPLTNGTGNILDLLLNVSALGDTTITIPTKITAPTTIQSNIDANFVGSAVQTTLLDVN
ILSGANGISYVYLAGDVNLTLVAPTGDLTATTSAVGAADATATLPTTLNNSAGADIPVTSKITNASGTAVTNGQLTAGTY
TVTYSATGYDDVTQSLVVSDPADTTAPSAPVVNDVTGNSTNGYTVTGTAEPGSTVTVKDETGTPIGTGTAGETGDYSLTL
PGSVGPNAPLTVTATDEAGNESDPTSATTPADPVSPVLVAPTGNLTATTSAAGAADASATLPTTLKNSAGADIPVTSKIT
NNSGIAVTNGQLSKGTYKVIYSASGYKDVTQNLVVSDPADTTAPEAPSVDTITGNTDTGYTVGGKGEPGSTITIKNPATG
EVLGTTIVDKDGNYSIKLPTGVKPGTQLSATATDAAGNVSDSTDFIIPALTSGMAIGNSGIIWVVSISQVVNYQQQMVQT
LAGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73099; Mature: 73099

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMQKQKPPRKKNKIITKRKVLSATMSGTLLMTSVVIPTAYSLLSNQITAQAAALNIDLL
CCCCCCCCCHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEHHHH
QNITSSNNSGTSTTNRWTSNSGSHNVDFTISGGALANISVLPGTRYATLVVPPELRGYVA
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEE
ATGNTSVSTNITIDFNKVALITAIVNAGDTLISDIAPLLSSNPLVTLNLAQVTQQLNLLR
ECCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
GIQDIGGGTFTSTTTLSNENALLSAPLDDGVGHILSLNVKTILQNLETAVNNLNATGTGA
HHHHHCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCE
IAVNAALTPLKLVLNGAIDDVLLPLTNGTGNILDLLLNVSALGDTTITIPTKITAPTTIQ
EEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECEEECCCCEEE
SNIDANFVGSAVQTTLLDVNILSGANGISYVYLAGDVNLTLVAPTGDLTATTSAVGAADA
CCCCCCCCCHHHEEEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEECCHHCCCCCC
TATLPTTLNNSAGADIPVTSKITNASGTAVTNGQLTAGTYTVTYSATGYDDVTQSLVVSD
CEECCCCCCCCCCCCCCEEEEECCCCCCEEECCEEEECEEEEEEECCCHHHHHHHEEEEC
PADTTAPSAPVVNDVTGNSTNGYTVTGTAEPGSTVTVKDETGTPIGTGTAGETGDYSLTL
CCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE
PGSVGPNAPLTVTATDEAGNESDPTSATTPADPVSPVLVAPTGNLTATTSAAGAADASAT
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC
LPTTLKNSAGADIPVTSKITNNSGIAVTNGQLSKGTYKVIYSASGYKDVTQNLVVSDPAD
CCHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHHHCCEEEECCCC
TTAPEAPSVDTITGNTDTGYTVGGKGEPGSTITIKNPATGEVLGTTIVDKDGNYSIKLPT
CCCCCCCCCCEEECCCCCCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEECC
GVKPGTQLSATATDAAGNVSDSTDFIIPALTSGMAIGNSGIIWVVSISQVVNYQQQMVQT
CCCCCCEEEEECCCCCCCCCCCCCEEEEEHHCCEEECCCCEEEEEEHHHHHHHHHHHHHH
LAGLV
HHCCC
>Mature Secondary Structure
MEMQKQKPPRKKNKIITKRKVLSATMSGTLLMTSVVIPTAYSLLSNQITAQAAALNIDLL
CCCCCCCCCHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEHHHH
QNITSSNNSGTSTTNRWTSNSGSHNVDFTISGGALANISVLPGTRYATLVVPPELRGYVA
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEE
ATGNTSVSTNITIDFNKVALITAIVNAGDTLISDIAPLLSSNPLVTLNLAQVTQQLNLLR
ECCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
GIQDIGGGTFTSTTTLSNENALLSAPLDDGVGHILSLNVKTILQNLETAVNNLNATGTGA
HHHHHCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCE
IAVNAALTPLKLVLNGAIDDVLLPLTNGTGNILDLLLNVSALGDTTITIPTKITAPTTIQ
EEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECEEECCCCEEE
SNIDANFVGSAVQTTLLDVNILSGANGISYVYLAGDVNLTLVAPTGDLTATTSAVGAADA
CCCCCCCCCHHHEEEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEECCHHCCCCCC
TATLPTTLNNSAGADIPVTSKITNASGTAVTNGQLTAGTYTVTYSATGYDDVTQSLVVSD
CEECCCCCCCCCCCCCCEEEEECCCCCCEEECCEEEECEEEEEEECCCHHHHHHHEEEEC
PADTTAPSAPVVNDVTGNSTNGYTVTGTAEPGSTVTVKDETGTPIGTGTAGETGDYSLTL
CCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE
PGSVGPNAPLTVTATDEAGNESDPTSATTPADPVSPVLVAPTGNLTATTSAAGAADASAT
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCC
LPTTLKNSAGADIPVTSKITNNSGIAVTNGQLSKGTYKVIYSASGYKDVTQNLVVSDPAD
CCHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHHHCCEEEECCCC
TTAPEAPSVDTITGNTDTGYTVGGKGEPGSTITIKNPATGEVLGTTIVDKDGNYSIKLPT
CCCCCCCCCCEEECCCCCCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEECC
GVKPGTQLSATATDAAGNVSDSTDFIIPALTSGMAIGNSGIIWVVSISQVVNYQQQMVQT
CCCCCCEEEEECCCCCCCCCCCCCEEEEEHHCCEEECCCCEEEEEEHHHHHHHHHHHHHH
LAGLV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA