Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is thiE
Identifier: 15673244
GI number: 15673244
Start: 1293610
End: 1294257
Strand: Reverse
Name: thiE
Synonym: L0201
Alternate gene names: 15673244
Gene position: 1294257-1293610 (Counterclockwise)
Preceding gene: 15673245
Following gene: 15673243
Centisome position: 54.71
GC content: 35.8
Gene sequence:
>648_bases ATGAAAAATAAAATTTTAGACCTGAGGGCATATTTTATTGCTGGCCCACAAGATTTTCCAAAACTTTCAATTGATGATGC AATCGATAAAATTTCTGTAATCATAAAAAGTGGAGTAACGGTTTATCAATTTCGTGATAAGGGAACAATTTATAAAAATA AAAATCAACGATTAGAAGTAGCAAAAAGACTACAAGAAGTAGCTCAGAAAGCGGCTGTTTCTTTTATTGTGAATGATGAT GTTGAATTAGCGCGTGAATTGTCAGCTGACGGGATTCATGTCGGACAAGACGATGATTCTGTCAGTAAAATTCGTGAGCT GATTGGCCAAGAAATGTGGGTAGGACTTTCTGTCAGTAATGATATGGAATTAGAAAGCGCTCAAAAGAGTGGGGCTGACT ATTTGGGAATTGGTCCAATTTATCCAACAAATAGCAAGTCCGACGCAGCAGAACCAATTGGGGTTGACCATTTAAGAAAA ATGCTTGAGCATAATCAATTACCAACTGTTGGAATTGGTGGAATTACTGAAAATTCACTGACAGAGCTTTCAAAAATTGG TCTGGGTGGAGTTGCGGTAATTTCTTTGCTGACAGAATCCGAAAATTACAAAAATATGGTTCAAAAAATTAAGCAAAATA TTAGATGA
Upstream 100 bases:
>100_bases GAAGTGATGCCAAAAGCTAAATTGTTTATTACTGAAGCTATTTCACAAACAATCAATGTTGGTCACGGTCACGGACCGTT AAACCATTGGGTGACAATTA
Downstream 100 bases:
>100_bases AAAAGATGTTGTACCCTTAAAAATACAACAAAACAAAATGATTCCGTTTTCTTTTTATTATATAAATTAAACTTACACAA ATGTAAGTTTTTTTTCTTTA
Product: thiamin-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKNKILDLRAYFIAGPQDFPKLSIDDAIDKISVIIKSGVTVYQFRDKGTIYKNKNQRLEVAKRLQEVAQKAAVSFIVNDD VELARELSADGIHVGQDDDSVSKIRELIGQEMWVGLSVSNDMELESAQKSGADYLGIGPIYPTNSKSDAAEPIGVDHLRK MLEHNQLPTVGIGGITENSLTELSKIGLGGVAVISLLTESENYKNMVQKIKQNIR
Sequences:
>Translated_215_residues MKNKILDLRAYFIAGPQDFPKLSIDDAIDKISVIIKSGVTVYQFRDKGTIYKNKNQRLEVAKRLQEVAQKAAVSFIVNDD VELARELSADGIHVGQDDDSVSKIRELIGQEMWVGLSVSNDMELESAQKSGADYLGIGPIYPTNSKSDAAEPIGVDHLRK MLEHNQLPTVGIGGITENSLTELSKIGLGGVAVISLLTESENYKNMVQKIKQNIR >Mature_215_residues MKNKILDLRAYFIAGPQDFPKLSIDDAIDKISVIIKSGVTVYQFRDKGTIYKNKNQRLEVAKRLQEVAQKAAVSFIVNDD VELARELSADGIHVGQDDDSVSKIRELIGQEMWVGLSVSNDMELESAQKSGADYLGIGPIYPTNSKSDAAEPIGVDHLRK MLEHNQLPTVGIGGITENSLTELSKIGLGGVAVISLLTESENYKNMVQKIKQNIR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=197, Percent_Identity=25.8883248730964, Blast_Score=80, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6325042, Length=152, Percent_Identity=34.8684210526316, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_LACLA (Q9CG48)
Other databases:
- EMBL: AE005176 - PIR: F86782 - RefSeq: NP_267418.1 - ProteinModelPortal: Q9CG48 - SMR: Q9CG48 - GeneID: 1114911 - GenomeReviews: AE005176_GR - KEGG: lla:L0201 - NMPDR: fig|272623.1.peg.1297 - HOGENOM: HBG754477 - OMA: CERYKTR - ProtClustDB: CLSK697654 - BioCyc: LLAC272623:L0201-MONOMER - BRENDA: 2.5.1.3 - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 23657; Mature: 23657
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKILDLRAYFIAGPQDFPKLSIDDAIDKISVIIKSGVTVYQFRDKGTIYKNKNQRLEV CCCCCEEHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHH AKRLQEVAQKAAVSFIVNDDVELARELSADGIHVGQDDDSVSKIRELIGQEMWVGLSVSN HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHEEEEECCC DMELESAQKSGADYLGIGPIYPTNSKSDAAEPIGVDHLRKMLEHNQLPTVGIGGITENSL CCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHH TELSKIGLGGVAVISLLTESENYKNMVQKIKQNIR HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKNKILDLRAYFIAGPQDFPKLSIDDAIDKISVIIKSGVTVYQFRDKGTIYKNKNQRLEV CCCCCEEHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHH AKRLQEVAQKAAVSFIVNDDVELARELSADGIHVGQDDDSVSKIRELIGQEMWVGLSVSN HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHEEEEECCC DMELESAQKSGADYLGIGPIYPTNSKSDAAEPIGVDHLRKMLEHNQLPTVGIGGITENSL CCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHH TELSKIGLGGVAVISLLTESENYKNMVQKIKQNIR HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471