Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is dltD
Identifier: 15673240
GI number: 15673240
Start: 1288984
End: 1290270
Strand: Reverse
Name: dltD
Synonym: L88729
Alternate gene names: 15673240
Gene position: 1290270-1288984 (Counterclockwise)
Preceding gene: 15673241
Following gene: 15673239
Centisome position: 54.54
GC content: 33.41
Gene sequence:
>1287_bases ATGAAAATTAAAATTTTTAGAGCCATTGGCCCATTAATTGCAGCTTTAGCCCTTGTTGGCTTACTGATATTTCTCCCAAT AAATGTTGGTATGAAATACTCAAAAGACCAACTTATTAAATTTGCTCAATCACCACTAAATACTCCAAGCTTTACAGGCT ATTCAATTAAAAAACAAGCCTATTCAGACCCCGAGTTTTTACCAGTTCTTGGTTCATCAGAAATGGAACATGTGGATTCT TTTCACCCAAGTGCCTATTTCAAAAAATACAATTCTGGTTTTACGCCATTCTTAGTAGGACAACCAGGAACAACTACTTT AACCCACTTTTTCTACATGAACTCTGTGGCAAATGAGTTAAAAAATCGTAAAATTGTTTTTGTCATTAGTCCACAATGGT TTTCAAAACAAGGAATTGTTGAAAGTGAATTGAAAAACTTTGTATCTAAAGGTGAGATTTACGGTTGGTTAAAAGAAGCA GATCCTAAAGAAAATACCACCACCCAACTTGCAAAACATTTATTAAGATTTAGATCGCTTAAATCTGAAGAGACGATTTA TAATTCTCTAGAACGTCTAGCAGATAAAAAACCACTGACCACTCTACAAAAAATGACTGTGGCGACCAATCTTCAATTTT GGCGAAAAGAAGATTTACTCTTCTCAAGTGTTTCACAATTCACAGCACAACCTCTTGGACTTACACCAAAAATTAATAAG TTTGCTAAAGAATTACCCAATGATCCAACCTCTGAAAACTTAGAAAAATTGGCAGTTGATCAAGGAAAAGATAGTTCAAA TAACAATCCTTTCCAAATCAATAATAAAGTTTGGGATAAGAAAATAAAATCCAAATACAAACATCTTGAAAATTTTAAAA AGCATGTTACCTATTTAGAAAGCCCAGAGTATCAGGATTTCCAACAGCTCTTAAATGTGTTTGCCAAAAATAATAATGAT GTTTTATTTGTTATTCAACCAGTAAATGGCTCATGGTCATCTTACACTGGAGTATCAAAAGCAACACTCGAAAATTTCAG CTCTAAAATTAAAACACAATTGCGCAGTCAAGGCTTTTATCAAATTGCTGACTTAACAGATATGTATAACACGCCTTATG CCTCTGGTGACACTGTCCACTTTGGTACTAAAGGTTGGTTGGCTACAGACAAAGCAATTGAAAAATTCATGAAGACACCA AGTAAGGTCAACTATCATATTGATAATTCGTTATTTTTATCAAAAGATTGGGCAATGAATGGTGCAACAGAGTCTATCAT AAATTAA
Upstream 100 bases:
>100_bases TTAGAAGGCGCTTTTGATATCAGTCTTCCACCATCAGAAATGGACCGTGAAGATTGGAATACAGCAAATAAAATAGCAGC ACGCGTTCAGGAAAAAAAGG
Downstream 100 bases:
>100_bases ATAATAAAAAAAGATTGACAAAAATAGAAAGAACAGTTATAATTGTTTTGGTTATGCCATAAGCATAGCCGTCGGTAGGT GAGGCTACCGCAGGGATACG
Product: D-alanine transfer protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKIKIFRAIGPLIAALALVGLLIFLPINVGMKYSKDQLIKFAQSPLNTPSFTGYSIKKQAYSDPEFLPVLGSSEMEHVDS FHPSAYFKKYNSGFTPFLVGQPGTTTLTHFFYMNSVANELKNRKIVFVISPQWFSKQGIVESELKNFVSKGEIYGWLKEA DPKENTTTQLAKHLLRFRSLKSEETIYNSLERLADKKPLTTLQKMTVATNLQFWRKEDLLFSSVSQFTAQPLGLTPKINK FAKELPNDPTSENLEKLAVDQGKDSSNNNPFQINNKVWDKKIKSKYKHLENFKKHVTYLESPEYQDFQQLLNVFAKNNND VLFVIQPVNGSWSSYTGVSKATLENFSSKIKTQLRSQGFYQIADLTDMYNTPYASGDTVHFGTKGWLATDKAIEKFMKTP SKVNYHIDNSLFLSKDWAMNGATESIIN
Sequences:
>Translated_428_residues MKIKIFRAIGPLIAALALVGLLIFLPINVGMKYSKDQLIKFAQSPLNTPSFTGYSIKKQAYSDPEFLPVLGSSEMEHVDS FHPSAYFKKYNSGFTPFLVGQPGTTTLTHFFYMNSVANELKNRKIVFVISPQWFSKQGIVESELKNFVSKGEIYGWLKEA DPKENTTTQLAKHLLRFRSLKSEETIYNSLERLADKKPLTTLQKMTVATNLQFWRKEDLLFSSVSQFTAQPLGLTPKINK FAKELPNDPTSENLEKLAVDQGKDSSNNNPFQINNKVWDKKIKSKYKHLENFKKHVTYLESPEYQDFQQLLNVFAKNNND VLFVIQPVNGSWSSYTGVSKATLENFSSKIKTQLRSQGFYQIADLTDMYNTPYASGDTVHFGTKGWLATDKAIEKFMKTP SKVNYHIDNSLFLSKDWAMNGATESIIN >Mature_428_residues MKIKIFRAIGPLIAALALVGLLIFLPINVGMKYSKDQLIKFAQSPLNTPSFTGYSIKKQAYSDPEFLPVLGSSEMEHVDS FHPSAYFKKYNSGFTPFLVGQPGTTTLTHFFYMNSVANELKNRKIVFVISPQWFSKQGIVESELKNFVSKGEIYGWLKEA DPKENTTTQLAKHLLRFRSLKSEETIYNSLERLADKKPLTTLQKMTVATNLQFWRKEDLLFSSVSQFTAQPLGLTPKINK FAKELPNDPTSENLEKLAVDQGKDSSNNNPFQINNKVWDKKIKSKYKHLENFKKHVTYLESPEYQDFQQLLNVFAKNNND VLFVIQPVNGSWSSYTGVSKATLENFSSKIKTQLRSQGFYQIADLTDMYNTPYASGDTVHFGTKGWLATDKAIEKFMKTP SKVNYHIDNSLFLSKDWAMNGATESIIN
Specific function: Could be responsible for the transfer of D-alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains [H]
COG id: COG3966
COG function: function code M; Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006998 - InterPro: IPR007002 - InterPro: IPR006999 - InterPro: IPR013830 [H]
Pfam domain/function: PF04914 DltD_C; PF04918 DltD_M; PF04915 DltD_N [H]
EC number: NA
Molecular weight: Translated: 48699; Mature: 48699
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKIFRAIGPLIAALALVGLLIFLPINVGMKYSKDQLIKFAQSPLNTPSFTGYSIKKQA CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHC YSDPEFLPVLGSSEMEHVDSFHPSAYFKKYNSGFTPFLVGQPGTTTLTHFFYMNSVANEL CCCCCCEEECCCCHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH KNRKIVFVISPQWFSKQGIVESELKNFVSKGEIYGWLKEADPKENTTTQLAKHLLRFRSL CCCEEEEEECCCHHCCCCCHHHHHHHHHHCCHHEEEHHCCCCCCCHHHHHHHHHHHHHHC KSEETIYNSLERLADKKPLTTLQKMTVATNLQFWRKEDLLFSSVSQFTAQPLGLTPKINK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FAKELPNDPTSENLEKLAVDQGKDSSNNNPFQINNKVWDKKIKSKYKHLENFKKHVTYLE HHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC SPEYQDFQQLLNVFAKNNNDVLFVIQPVNGSWSSYTGVSKATLENFSSKIKTQLRSQGFY CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE QIADLTDMYNTPYASGDTVHFGTKGWLATDKAIEKFMKTPSKVNYHIDNSLFLSKDWAMN EEHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCC GATESIIN CCHHHHCC >Mature Secondary Structure MKIKIFRAIGPLIAALALVGLLIFLPINVGMKYSKDQLIKFAQSPLNTPSFTGYSIKKQA CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHC YSDPEFLPVLGSSEMEHVDSFHPSAYFKKYNSGFTPFLVGQPGTTTLTHFFYMNSVANEL CCCCCCEEECCCCHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH KNRKIVFVISPQWFSKQGIVESELKNFVSKGEIYGWLKEADPKENTTTQLAKHLLRFRSL CCCEEEEEECCCHHCCCCCHHHHHHHHHHCCHHEEEHHCCCCCCCHHHHHHHHHHHHHHC KSEETIYNSLERLADKKPLTTLQKMTVATNLQFWRKEDLLFSSVSQFTAQPLGLTPKINK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FAKELPNDPTSENLEKLAVDQGKDSSNNNPFQINNKVWDKKIKSKYKHLENFKKHVTYLE HHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC SPEYQDFQQLLNVFAKNNNDVLFVIQPVNGSWSSYTGVSKATLENFSSKIKTQLRSQGFY CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE QIADLTDMYNTPYASGDTVHFGTKGWLATDKAIEKFMKTPSKVNYHIDNSLFLSKDWAMN EEHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCC GATESIIN CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]