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The map label for this gene is tra981G

Identifier: 15673230

GI number: 15673230

Start: 1275416

End: 1276255

Strand: Reverse

Name: tra981G

Synonym: L0438

Alternate gene names: 15673230

Gene position: 1276255-1275416 (Counterclockwise)

Preceding gene: 15673231

Following gene: 15673229

Centisome position: 53.95

GC content: 35.95

Gene sequence:

>840_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATATCAGACTAAGCTGTCAACTCCTTGATGTTCCTGAATCAAGTTATTA
TGAACGGATTAACCGACATCCATCTAAAACTCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTTCTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAGCAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATCACAT
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAAGTTTGGTCAACCGACATTACTTATATTCCTACTC
AACAAGGATGGACTTATCTCTCAACCATTATGGATCGTTATACTAAAAAAGTCATTGCTTGGGATTTGGGCAAGCGAATG
ACTGTAGAATTAGTGCAAAGAACTTTAAATAAGGCCATTAAATCACAAGACTATCCAGAAGCTGTTATTCTTCATTCTGA
CCAAGGAAGCCAGTATACGAGTCTAGAGTATGAAGAGTTGCTTAAGTATTATGGGATGACTCACTCTTTCAGTCGAAGGG
GATACCCTTATCATAATGCCAGTCTTGAATCTTGGCATGGACATTTAAAAAGAGAGTGGGTGTATCAATTTAAATATAAG
AACTTTGAAGAAGCCTATCAGAGTATTTTCTGGTACATCGAAGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGG
GTATCTTACACCTAATCAATTTGAAAAGGTAAGTGCTTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGCATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
AATAAATAGATTAAAATTCTACGTTTGTTACTCTAAAAACTTGACTTAACGTCAAGTGATAAAATAGAATGAGAATATGA
AAACTCCTACAAAAAATATT

Product: transposase of IS981G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAQTIQTLALNIRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWTYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Sequences:

>Translated_279_residues
MAQTIQTLALNIRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWTYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
>Mature_278_residues
AQTIQTLALNIRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWTYLSTIMDRYTKKVIAWDLGKRMT
VELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKN
FEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=240, Percent_Identity=27.5, Blast_Score=108, Evalue=5e-24,
Organism=Escherichia coli, GI1788405, Length=274, Percent_Identity=31.7518248175182, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1787263, Length=274, Percent_Identity=31.7518248175182, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1786753, Length=274, Percent_Identity=31.7518248175182, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1786570, Length=274, Percent_Identity=31.7518248175182, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1786490, Length=274, Percent_Identity=31.7518248175182, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1789981, Length=230, Percent_Identity=33.9130434782609, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33015; Mature: 32884

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNIRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWTYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNIRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWTYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]