Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ymgJ
Identifier: 15673224
GI number: 15673224
Start: 1267256
End: 1267498
Strand: Reverse
Name: ymgJ
Synonym: L67002
Alternate gene names: NA
Gene position: 1267498-1267256 (Counterclockwise)
Preceding gene: 15673226
Following gene: 15673223
Centisome position: 53.58
GC content: 39.09
Gene sequence:
>243_bases ATGATTTGGTCATTAATTGTTGGTGCATTAATCGGATTAATCGCTGGTGCGATTACAAATAAAGGAAGTTCAATGGGCTG GATTGCTAACATTTTAGCAGGGTTAGTTGGATCTTTTGTGGGTCAAGCATTACTTGGAACTTGGGGACCTTCGCTAGCTG GTATGGCATTAATACCATCCATTGTTGGAGCAGTGATTGTGGTTGCTGTAGTTTCTTTCTTTTTATCTAGAATGAATCAT TAG
Upstream 100 bases:
>100_bases TTAATAAATTATAAAATAAGTCATATCATTTGAATGCGCTTTCTAATTGTGTTAGATTTGAGTTAGATCATAAAATGTAT TCTAAAGAAAGAGGTGGCTT
Downstream 100 bases:
>100_bases ATCTTAAGATTTTAAGATCTAGAAAGGAGGAATTTTGGCAACTGGAAAGAAAATAATACTAATTATCCTTGATCTCCTTT TACTTACACTTGTTCTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Associated Protein; Transglycosylase-Associated Protein; Stress-Like Protein; Membran Protein
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPSIVGAVIVVAVVSFFLSRMNH
Sequences:
>Translated_80_residues MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPSIVGAVIVVAVVSFFLSRMNH >Mature_80_residues MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPSIVGAVIVVAVVSFFLSRMNH
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8079; Mature: 8079
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPS CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IVGAVIVVAVVSFFLSRMNH HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIWSLIVGALIGLIAGAITNKGSSMGWIANILAGLVGSFVGQALLGTWGPSLAGMALIPS CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IVGAVIVVAVVSFFLSRMNH HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA