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The map label for this gene is tra981E

Identifier: 15673177

GI number: 15673177

Start: 1216209

End: 1217048

Strand: Reverse

Name: tra981E

Synonym: L0436

Alternate gene names: 15673177

Gene position: 1217048-1216209 (Counterclockwise)

Preceding gene: 15673178

Following gene: 15673169

Centisome position: 51.45

GC content: 36.31

Gene sequence:

>840_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATGTCAGACTAAGCTGTCAACTCCTTGGTGTTCCTGAATCAAGTTATTA
TGAACGGATTAACCGACATCCATCTAAAACCCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTACTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAGCAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATTATAC
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAGGTTTGGTCAACCGACATTACTTATATTCCTACTC
AACAAGGATGGGCTTATCTCTCAACCATTATGGATCGTTATACTAAAAAAGTCATTGCTTGGGATTTGGGCAAGCGAATG
ACTGTAGAATTAGTGCAAAGAACTTTAAATAAGGCCATTAAATCACAAGACTATCCAGAAGCTGTTATTCTTCATTCTGA
CCAAGGAAGCCAGTATACGAGTCTAGAGTATGAAGAGTTGCTTAAGTATTATGGGATGACTCACTCTTTCAGTCGAAGGG
GATACCCTTATCATAATACCAGTCTTGAATCTTGGCATGGACATTTAAAAAGAGAGTGGGTGTATCAATTTAAATATAAG
AACTTTGAAGAAGCCTATCAGAGTATTTTCTGGTACATCGAAGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGG
GTATCTTACACCTAATCAATTTGAAAAGGTAAGTGCTTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGTATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
AATAAATAGATTAAAATTCTACGTTTGTTACTCTAAAAACTTGACTTAACGTCAACTATTTTTTCAAACCGTTAGCAGAC
TGCTTTAGAATATAATATTA

Product: transposase of IS981E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAQTIQTLALNVRLSCQLLGVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDYTNRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNTSLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Sequences:

>Translated_279_residues
MAQTIQTLALNVRLSCQLLGVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDYTNRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNTSLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
>Mature_278_residues
AQTIQTLALNVRLSCQLLGVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDYTNRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMT
VELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNTSLESWHGHLKREWVYQFKYKN
FEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=244, Percent_Identity=27.4590163934426, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1788405, Length=271, Percent_Identity=31.3653136531365, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1787263, Length=271, Percent_Identity=31.3653136531365, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786753, Length=271, Percent_Identity=31.3653136531365, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786570, Length=271, Percent_Identity=31.3653136531365, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786490, Length=271, Percent_Identity=31.3653136531365, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1789981, Length=230, Percent_Identity=33.4782608695652, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32957; Mature: 32826

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNVRLSCQLLGVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDYTNRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNTSLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNVRLSCQLLGVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDYTNRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNTSLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]