Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yldB
Identifier: 15673101
GI number: 15673101
Start: 1132860
End: 1133636
Strand: Reverse
Name: yldB
Synonym: L132621
Alternate gene names: NA
Gene position: 1133636-1132860 (Counterclockwise)
Preceding gene: 15673130
Following gene: 15673088
Centisome position: 47.92
GC content: 35.65
Gene sequence:
>777_bases ATGATTTTTTTATCAACTGTATTAATTTTATGTTGTACTTGGTATTTTTTAAAATTTTTAGCTCATTTTTCTCGTAAAAT TCACGATGAGGTTCGAAAATTATCTGTCTATACTCATTTTCTTTCAAAATGGCTTCAGTCAGCTCCTGCAACATTTACCT ATACCGCCATTTTTTGCGCTTTTACGCTAGTTCAAAGAACTGCACCGCAACACTTAATTAACATTCTAACGAACCATTCT TCAACAAGTATAGCCAGAGTTTCTGATAAACCAATCTCTACTTTTTTTGATAGTGCTTTTTGGGTTGCGGATAACGGAGC AGGTCTCCTCATTTATGTTGTCCTTTTTTGGACCGTTATTGCTTGGGCAGAACGAAAATATGGTTCACCAAGAATGATTG TCATCACATTGTCTGGTCATATTTTAGCCAGTCTCACTACTATTTTTCTTGAACTTTGGGCAATAAATAGCGGACGTGCT CCCAGTTCTTTAGCAATGGCAACTGATGTTGGTGTTTCATATATTTTAGTTGCTGGTTGCGCTGCTGCCATCCTTATAAT GAGAAAACGAATGTTTTATATTGGACTTATAATTTTAGGACTATTTATCTTACTTCCGTTATTCGTTGAACATAGTATTT GGGATATGGGTCATCTATTTGCGGCTTTTTTTGGCTTTATTTCTGCTAGATTACTCCTTAAATTATCACCTGTGCGTACG GTCAGTTCTCCTTACGAACTTCTTTTGAAATGTCGTTCAGAACTCTCCAACAAATAA
Upstream 100 bases:
>100_bases CGAGCCTCTTATAATCTTCTATTTTTATGGTCTAAGCCTAATAAATATGCTAACCCCTCCATAAGCTTTAATGGTATAAT AAAAAGAAAAGGAATAAATT
Downstream 100 bases:
>100_bases AGACTAACCATATACCACCAAGCACCCCATTAATCTGCTGACCAAGAGGGCCTACTAACTGAGGAATTGCACCCGCAATG AAAGAAAGCAAAGTTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIFLSTVLILCCTWYFLKFLAHFSRKIHDEVRKLSVYTHFLSKWLQSAPATFTYTAIFCAFTLVQRTAPQHLINILTNHS STSIARVSDKPISTFFDSAFWVADNGAGLLIYVVLFWTVIAWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSGRA PSSLAMATDVGVSYILVAGCAAAILIMRKRMFYIGLIILGLFILLPLFVEHSIWDMGHLFAAFFGFISARLLLKLSPVRT VSSPYELLLKCRSELSNK
Sequences:
>Translated_258_residues MIFLSTVLILCCTWYFLKFLAHFSRKIHDEVRKLSVYTHFLSKWLQSAPATFTYTAIFCAFTLVQRTAPQHLINILTNHS STSIARVSDKPISTFFDSAFWVADNGAGLLIYVVLFWTVIAWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSGRA PSSLAMATDVGVSYILVAGCAAAILIMRKRMFYIGLIILGLFILLPLFVEHSIWDMGHLFAAFFGFISARLLLKLSPVRT VSSPYELLLKCRSELSNK >Mature_258_residues MIFLSTVLILCCTWYFLKFLAHFSRKIHDEVRKLSVYTHFLSKWLQSAPATFTYTAIFCAFTLVQRTAPQHLINILTNHS STSIARVSDKPISTFFDSAFWVADNGAGLLIYVVLFWTVIAWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSGRA PSSLAMATDVGVSYILVAGCAAAILIMRKRMFYIGLIILGLFILLPLFVEHSIWDMGHLFAAFFGFISARLLLKLSPVRT VSSPYELLLKCRSELSNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29042; Mature: 29042
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLSTVLILCCTWYFLKFLAHFSRKIHDEVRKLSVYTHFLSKWLQSAPATFTYTAIFCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FTLVQRTAPQHLINILTNHSSTSIARVSDKPISTFFDSAFWVADNGAGLLIYVVLFWTVI HHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHH AWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSGRAPSSLAMATDVGVSYILVAGC HHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AAAILIMRKRMFYIGLIILGLFILLPLFVEHSIWDMGHLFAAFFGFISARLLLKLSPVRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VSSPYELLLKCRSELSNK CCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFLSTVLILCCTWYFLKFLAHFSRKIHDEVRKLSVYTHFLSKWLQSAPATFTYTAIFCA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FTLVQRTAPQHLINILTNHSSTSIARVSDKPISTFFDSAFWVADNGAGLLIYVVLFWTVI HHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHH AWAERKYGSPRMIVITLSGHILASLTTIFLELWAINSGRAPSSLAMATDVGVSYILVAGC HHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AAAILIMRKRMFYIGLIILGLFILLPLFVEHSIWDMGHLFAAFFGFISARLLLKLSPVRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VSSPYELLLKCRSELSNK CCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA