Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi203
Identifier: 15672992
GI number: 15672992
Start: 1038491
End: 1038928
Strand: Reverse
Name: pi203
Synonym: L38253
Alternate gene names: NA
Gene position: 1038928-1038491 (Counterclockwise)
Preceding gene: 15672993
Following gene: 15672991
Centisome position: 43.92
GC content: 32.42
Gene sequence:
>438_bases ATGAGTAAACTTAGAGAGCTTTCTCGAGAGCTTGGTGCTGAAATTATATATTTCATTCCATCAGAAAATAATATTGTCCT AGTTGATGATATTAAAGGATTATATCTTCCTGAATATGATATTATCTATATCAGAGATGATTTGACAATAACAGAACAAG AAAACGTTATTCTTCATGAATTAGGACATTGTTACTGTGGACACACCCATTATAATTGCCATTCTAAAATGTTTGGGAGT AAGCAAGAGGCACAAGCTGACCGATTCATGGTAGTTCACAGATTCAATGAATGGCTTTCTAAATGGGATTTTGCACCAGA ACCAAATGAAATTAATATCAGTCAGTTCATGGATGCGTATGAACTCAATAATAAACTTAAGTGGATATGCGAATTAGTTA TTGAAGAGTATACTGCTGAATATCAAGAAGTTATTTAA
Upstream 100 bases:
>100_bases CTAGTGCCTATGGCGGTGGACAGCTTAACGATAATGATAAAGAATTCTTCAAACGTTTGTTGAAAAATACTCTTAAAGAA AAAATTGATAAAGGCGATTT
Downstream 100 bases:
>100_bases ATAAAAACTACGAGCAATGTCTTGATTCTCATAAAAAGCTAGATTAGGAGGAAATAATGGATAAATTTGATAAAATGTCA CAAAAAAATCCTGATTTAGC
Product: prophage pi2 protein 03
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSKLRELSRELGAEIIYFIPSENNIVLVDDIKGLYLPEYDIIYIRDDLTITEQENVILHELGHCYCGHTHYNCHSKMFGS KQEAQADRFMVVHRFNEWLSKWDFAPEPNEINISQFMDAYELNNKLKWICELVIEEYTAEYQEVI
Sequences:
>Translated_145_residues MSKLRELSRELGAEIIYFIPSENNIVLVDDIKGLYLPEYDIIYIRDDLTITEQENVILHELGHCYCGHTHYNCHSKMFGS KQEAQADRFMVVHRFNEWLSKWDFAPEPNEINISQFMDAYELNNKLKWICELVIEEYTAEYQEVI >Mature_144_residues SKLRELSRELGAEIIYFIPSENNIVLVDDIKGLYLPEYDIIYIRDDLTITEQENVILHELGHCYCGHTHYNCHSKMFGSK QEAQADRFMVVHRFNEWLSKWDFAPEPNEINISQFMDAYELNNKLKWICELVIEEYTAEYQEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17256; Mature: 17125
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLRELSRELGAEIIYFIPSENNIVLVDDIKGLYLPEYDIIYIRDDLTITEQENVILHE CCHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCEEEECCCCCHHHH LGHCYCGHTHYNCHSKMFGSKQEAQADRFMVVHRFNEWLSKWDFAPEPNEINISQFMDAY HCCEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHH ELNNKLKWICELVIEEYTAEYQEVI HHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLRELSRELGAEIIYFIPSENNIVLVDDIKGLYLPEYDIIYIRDDLTITEQENVILHE CHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCEEEECCCCCHHHH LGHCYCGHTHYNCHSKMFGSKQEAQADRFMVVHRFNEWLSKWDFAPEPNEINISQFMDAY HCCEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHH ELNNKLKWICELVIEEYTAEYQEVI HHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA