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The map label for this gene is pi201

Identifier: 15672990

GI number: 15672990

Start: 1036642

End: 1037766

Strand: Reverse

Name: pi201

Synonym: L36404

Alternate gene names: 15672990

Gene position: 1037766-1036642 (Counterclockwise)

Preceding gene: 15672991

Following gene: 15672967

Centisome position: 43.87

GC content: 33.16

Gene sequence:

>1125_bases
ATGGCTACATATCAAAAGCGTGGTAAAACTTGGCAGTATTCAATATCAAGAACAAAACAAGGACTTCCTCGTCTAACAAA
GGGTGGTTTTTCTACAAAGTCCGATGCACAAGCTGAAGCAATGGATATTGAAAGCAAACTAAAAAAAGGATTTATTGTTG
ACCCCATTAAGCAAGAAATTTCCGAATATTTTAAAGACTGGATGGAACTTTATAAGAAAAATGCAATTGATGAAATGACT
TATAAAGGTTATGAGCAAACGTTAAAATATTTAAAAACCTATATGCCAAATGTTTTAATTTCCGAAATAACAGCATCTTC
TTATCAAAGAGCGCTAAATAAATTTGCTGAAACACACGCCAAAGCATCTACAAAAGGGTTTCATACTAGAGTTAGAGCAT
CTATTCAACCACTCATTGAAGAGGGACGACTGCAAAAAGATTTTACCACTCGTGCAGTAGTTAAAGGTAATGGAAATGAT
AAAGCCGAGCAAGACAAGTTTGTAAATTTTGATGAATACAAGCAATTAGTTGATTATTTCAGAAATAGGCTTAATCCAAA
CTATTCATCTCCCACTATGCTGTTTATAATTTCAATTACTGGCATGAGAGCCAGTGAAGCTTTTGGCTTAGTCTGGGATG
ATATTGATTTTAATAATAACACTATCAAGTGTCGCAGAACTTGGAATTACAGAAATAAAGTAGGTGGTTTCAAAAAGCCC
AAAACAGATGCTGGAATAAGAGATATTGTTATAGATGATGAAAGTATGCAATTGCTAAAAGATTTTAGAGAACAGCAAAA
AACATTATTTGAAAGTTTGGGTATAAAACCGATACATGACTTTGTTTGTTATCATCCTTATAGAAAAATAATAACTCTCT
CAGCTTTGCAAAATACATTAGATCATGCATTGAAAAAACTAAATATTTCTACTCCACTTACTGTACACGGTTTAAGGCAT
ACTCATGCTTCTGTTCTCCTCTATCATGGAGTTGATATCATGACTGTTTCAAAACGCCTAGGACACGCAAGTGTGGCTAT
CACACAGCAAACCTATATCCATATTATAAAAGAGCTAGAAAATAAAGATAAGGATAAAATAATTGAGCTACTAATGGAGT
TATAA

Upstream 100 bases:

>100_bases
TGGACGGCAAGGGCGGATTAAATATCAAATATAGTATAAACGCTTCAAAAAGCTATTTTACTGTACTCATTTTATCATAG
AAATGGAGTAAAAATCAAAT

Downstream 100 bases:

>100_bases
TTTTCTTACAACAAAAATACAACAAATCATTAAAAATCAAGAATAAAGCCATTATCTAAAGCATATCTATCCTTTACTAT
GTAGTTTTTCATGGGAGCTC

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MATYQKRGKTWQYSISRTKQGLPRLTKGGFSTKSDAQAEAMDIESKLKKGFIVDPIKQEISEYFKDWMELYKKNAIDEMT
YKGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHAKASTKGFHTRVRASIQPLIEEGRLQKDFTTRAVVKGNGND
KAEQDKFVNFDEYKQLVDYFRNRLNPNYSSPTMLFIISITGMRASEAFGLVWDDIDFNNNTIKCRRTWNYRNKVGGFKKP
KTDAGIRDIVIDDESMQLLKDFREQQKTLFESLGIKPIHDFVCYHPYRKIITLSALQNTLDHALKKLNISTPLTVHGLRH
THASVLLYHGVDIMTVSKRLGHASVAITQQTYIHIIKELENKDKDKIIELLMEL

Sequences:

>Translated_374_residues
MATYQKRGKTWQYSISRTKQGLPRLTKGGFSTKSDAQAEAMDIESKLKKGFIVDPIKQEISEYFKDWMELYKKNAIDEMT
YKGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHAKASTKGFHTRVRASIQPLIEEGRLQKDFTTRAVVKGNGND
KAEQDKFVNFDEYKQLVDYFRNRLNPNYSSPTMLFIISITGMRASEAFGLVWDDIDFNNNTIKCRRTWNYRNKVGGFKKP
KTDAGIRDIVIDDESMQLLKDFREQQKTLFESLGIKPIHDFVCYHPYRKIITLSALQNTLDHALKKLNISTPLTVHGLRH
THASVLLYHGVDIMTVSKRLGHASVAITQQTYIHIIKELENKDKDKIIELLMEL
>Mature_373_residues
ATYQKRGKTWQYSISRTKQGLPRLTKGGFSTKSDAQAEAMDIESKLKKGFIVDPIKQEISEYFKDWMELYKKNAIDEMTY
KGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHAKASTKGFHTRVRASIQPLIEEGRLQKDFTTRAVVKGNGNDK
AEQDKFVNFDEYKQLVDYFRNRLNPNYSSPTMLFIISITGMRASEAFGLVWDDIDFNNNTIKCRRTWNYRNKVGGFKKPK
TDAGIRDIVIDDESMQLLKDFREQQKTLFESLGIKPIHDFVCYHPYRKIITLSALQNTLDHALKKLNISTPLTVHGLRHT
HASVLLYHGVDIMTVSKRLGHASVAITQQTYIHIIKELENKDKDKIIELLMEL

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43258; Mature: 43127

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYQKRGKTWQYSISRTKQGLPRLTKGGFSTKSDAQAEAMDIESKLKKGFIVDPIKQEI
CCCCHHCCCCEEEEHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
SEYFKDWMELYKKNAIDEMTYKGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHA
HHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KASTKGFHTRVRASIQPLIEEGRLQKDFTTRAVVKGNGNDKAEQDKFVNFDEYKQLVDYF
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHH
RNRLNPNYSSPTMLFIISITGMRASEAFGLVWDDIDFNNNTIKCRRTWNYRNKVGGFKKP
HHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHCCCCCCC
KTDAGIRDIVIDDESMQLLKDFREQQKTLFESLGIKPIHDFVCYHPYRKIITLSALQNTL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DHALKKLNISTPLTVHGLRHTHASVLLYHGVDIMTVSKRLGHASVAITQQTYIHIIKELE
HHHHHHCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHH
NKDKDKIIELLMEL
CCCHHHHHHHHHHC
>Mature Secondary Structure 
ATYQKRGKTWQYSISRTKQGLPRLTKGGFSTKSDAQAEAMDIESKLKKGFIVDPIKQEI
CCCHHCCCCEEEEHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
SEYFKDWMELYKKNAIDEMTYKGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHA
HHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KASTKGFHTRVRASIQPLIEEGRLQKDFTTRAVVKGNGNDKAEQDKFVNFDEYKQLVDYF
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHH
RNRLNPNYSSPTMLFIISITGMRASEAFGLVWDDIDFNNNTIKCRRTWNYRNKVGGFKKP
HHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHCCCCCCC
KTDAGIRDIVIDDESMQLLKDFREQQKTLFESLGIKPIHDFVCYHPYRKIITLSALQNTL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DHALKKLNISTPLTVHGLRHTHASVLLYHGVDIMTVSKRLGHASVAITQQTYIHIIKELE
HHHHHHCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHH
NKDKDKIIELLMEL
CCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]