| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ygaF
Identifier: 15672599
GI number: 15672599
Start: 604542
End: 604718
Strand: Direct
Name: ygaF
Synonym: L4536
Alternate gene names: NA
Gene position: 604542-604718 (Clockwise)
Preceding gene: 15672598
Following gene: 15672600
Centisome position: 25.56
GC content: 37.29
Gene sequence:
>177_bases ATGCCTAAACAACGATTTTATTCTTTTATGATTGGAACGGTACTTGAAGCTTGGATTTTTAGCTGGTCCTTCCTATCTGC TTCGTGGTTTTTAGCCACGTTTTTCGGCTTTCTTTTAGTACGCCGAATCTTCCTTGCTTATCGCTTGGATAAATTTATAC GTGATATGAAAATGTGA
Upstream 100 bases:
>100_bases CAAATTGAAAAGCTTTTTAGAAAATAAAATGCTTTTTTTATTAAGTATTATTCAACACAATCCATTGACATTTCTGGTTT AAAAATGTCATAATAGAGGC
Downstream 100 bases:
>100_bases TTTTTATCACAATTTTTATTATAAAAGTACTGACAAAGTTTTATGACGAAAAAATATTCTCTGTCAGTTGTTCTTATTTA TGAAATAATAGGGGAGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MPKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIFLAYRLDKFIRDMKM
Sequences:
>Translated_58_residues MPKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIFLAYRLDKFIRDMKM >Mature_57_residues PKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIFLAYRLDKFIRDMKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7129; Mature: 6997
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIFLAYRLDKFIRDMKM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIFLAYRLDKFIRDMKM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA