Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yfhH
Identifier: 15672564
GI number: 15672564
Start: 576304
End: 577077
Strand: Direct
Name: yfhH
Synonym: L176238
Alternate gene names: NA
Gene position: 576304-577077 (Clockwise)
Preceding gene: 15672563
Following gene: 15672565
Centisome position: 24.36
GC content: 32.82
Gene sequence:
>774_bases ATGAATTATATAGCCGTTTTGGTAACTTTATTACTTTATTTCATCTGTTGGTTTCTTATTGCGACATCTAAGAAGAATTA CGGATTGATAGATATTGCTTGGGGCGGAGGATTTGTTCTTACAGCTGTGGTCTCTTATTTATTTTCTCCGAGAATTACGA TTCAAAATAGCCTAATCTTAGTATTAGTCATATTATGGGGAGTACGTTTAGCAATTCATTTAGGAAGACGAAATTGGAAT AAACCCGAGGATTATCGCTATACAAATATGCGTAAGAGGTGGGGCAATAATTTTCCAAAATTGAAAGCTTTTCTAACGGT ATTTATGGTGCAATATCTTTTGTTAATCATTATTTCACTCCCAATTATTCAAGTCAATTCAAATGTTAATTCTCAATTTT ATTGGTGGCAAATTTTAGGTATAATAATTTGGATATTTGGCTTTATCTTTGAAGTTTTTGGAGATCGTCAGTTAGAAGTC TTTAAAAAACTACCCCAAAATAAAGGAAAACTATTGACTAGTGGCCTGTGGTCACTAACACGACATCCTAATTATTTTGG CGAGTCAATGTGTTGGTGGGGAATATTCTTAATCTCTTTGACGACTTTATCAACGCTTTGGTTGGTTATTAGTCCACTAT TGATTACTAGTCTCCTTTTATTTGTATCTGGTGTACCAATTCTTGAAAAAAAATATAAGAATCGTGAAGATTTTAAAGAA TATGCAAAAACTACCCCGAAGTTTGTTCCTTTTATTGGTAAAAAGGGCTTGTAG
Upstream 100 bases:
>100_bases AAACTACTAAAAACTGTGAAATTATAGACAGTTCAGCAGCAATTGGAATTTCTGCAGGGATTGGAAGTTTAGCAATTGCC GGACTATTAAAGGAGGTCAA
Downstream 100 bases:
>100_bases ACTAAGTTCTCAATCATAAAGGCCCATAATTTTAGTAATTTCCTTTTTATTCTTATATAAAACAACATTCGTATGCTTTC AAAATTGTAAGCTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVVSYLFSPRITIQNSLILVLVILWGVRLAIHLGRRNWN KPEDYRYTNMRKRWGNNFPKLKAFLTVFMVQYLLLIIISLPIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEV FKKLPQNKGKLLTSGLWSLTRHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSLLLFVSGVPILEKKYKNREDFKE YAKTTPKFVPFIGKKGL
Sequences:
>Translated_257_residues MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVVSYLFSPRITIQNSLILVLVILWGVRLAIHLGRRNWN KPEDYRYTNMRKRWGNNFPKLKAFLTVFMVQYLLLIIISLPIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEV FKKLPQNKGKLLTSGLWSLTRHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSLLLFVSGVPILEKKYKNREDFKE YAKTTPKFVPFIGKKGL >Mature_257_residues MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVVSYLFSPRITIQNSLILVLVILWGVRLAIHLGRRNWN KPEDYRYTNMRKRWGNNFPKLKAFLTVFMVQYLLLIIISLPIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEV FKKLPQNKGKLLTSGLWSLTRHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSLLLFVSGVPILEKKYKNREDFKE YAKTTPKFVPFIGKKGL
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=254, Percent_Identity=31.8897637795276, Blast_Score=123, Evalue=9e-29, Organism=Drosophila melanogaster, GI28574404, Length=254, Percent_Identity=31.8897637795276, Blast_Score=123, Evalue=9e-29, Organism=Drosophila melanogaster, GI21355723, Length=254, Percent_Identity=31.8897637795276, Blast_Score=123, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29990; Mature: 29990
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVVSYLFSPRITIQNSLIL CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEHHHHHH VLVILWGVRLAIHLGRRNWNKPEDYRYTNMRKRWGNNFPKLKAFLTVFMVQYLLLIIISL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEVFKKLPQNKGKLLTSGLWSLT CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH RHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSLLLFVSGVPILEKKYKNREDFKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH YAKTTPKFVPFIGKKGL HHHCCCCHHHCCCCCCC >Mature Secondary Structure MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVVSYLFSPRITIQNSLIL CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEHHHHHH VLVILWGVRLAIHLGRRNWNKPEDYRYTNMRKRWGNNFPKLKAFLTVFMVQYLLLIIISL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEVFKKLPQNKGKLLTSGLWSLT CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH RHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSLLLFVSGVPILEKKYKNREDFKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH YAKTTPKFVPFIGKKGL HHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA