Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yfhF
Identifier: 15672562
GI number: 15672562
Start: 574106
End: 574507
Strand: Direct
Name: yfhF
Synonym: L174076
Alternate gene names: NA
Gene position: 574106-574507 (Clockwise)
Preceding gene: 15672561
Following gene: 15672563
Centisome position: 24.27
GC content: 29.35
Gene sequence:
>402_bases ATGAATTTTATTAAACCCTTTATTATAAGTGGAGTAATTTTTTTAATTTTAGATATTTGCTGGCTCTTTTTTGCAAATAA AAAAATCTATCAGCCAAATATTGGTAACTTGATGGGAGATTTTAAAGTTATTCCGGCCATTATCTTCTATATTATTTATC TAGGAGCACTAACATTTTTTGTATTAATGCCCGGACTTGAAAAAAATAGTATAACTTACGTCTTACTGAGTGGTGCTCTA CTAGGATTAGTATGTTATTCTACATACGATTTAACAAATTTGGCATCAATTAAAGACTGGTCACTAATGGTAACAATAAT TGATATTATTTGGGGGACTTTTGTAAGCTCTTTGAGTGCAAGTCTTTCATTTCTTGTGATTACAAAGTTTATGGAAGGAT AA
Upstream 100 bases:
>100_bases GATGGTTTGGGCAATAAATAATGATTATATAACATAAAAATTTTGATATTTATAAGTATATACATCTGTAAAACTGAAAG CTATAGATTGGAGAAGAATA
Downstream 100 bases:
>100_bases AGAATGGAAAAGGTAAAATCTGAAGACCGTCTACTAGAAAGTATCATAGCAGGAGCGCAAAAGGTTATTAACGGAAAGGA TGAACTAAACAAAATAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVIPAIIFYIIYLGALTFFVLMPGLEKNSITYVLLSGAL LGLVCYSTYDLTNLASIKDWSLMVTIIDIIWGTFVSSLSASLSFLVITKFMEG
Sequences:
>Translated_133_residues MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVIPAIIFYIIYLGALTFFVLMPGLEKNSITYVLLSGAL LGLVCYSTYDLTNLASIKDWSLMVTIIDIIWGTFVSSLSASLSFLVITKFMEG >Mature_133_residues MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVIPAIIFYIIYLGALTFFVLMPGLEKNSITYVLLSGAL LGLVCYSTYDLTNLASIKDWSLMVTIIDIIWGTFVSSLSASLSFLVITKFMEG
Specific function: Unknown
COG id: COG4852
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14928; Mature: 14928
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVIPAIIFYIIYLGALTFF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLMPGLEKNSITYVLLSGALLGLVCYSTYDLTNLASIKDWSLMVTIIDIIWGTFVSSLSA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLSFLVITKFMEG HHHHHHHHHHHCC >Mature Secondary Structure MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVIPAIIFYIIYLGALTFF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLMPGLEKNSITYVLLSGALLGLVCYSTYDLTNLASIKDWSLMVTIIDIIWGTFVSSLSA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLSFLVITKFMEG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA