Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is xylH
Identifier: 15672556
GI number: 15672556
Start: 568265
End: 568450
Strand: Reverse
Name: xylH
Synonym: L168282
Alternate gene names: NA
Gene position: 568450-568265 (Counterclockwise)
Preceding gene: 15672568
Following gene: 15672555
Centisome position: 24.03
GC content: 35.48
Gene sequence:
>186_bases ATGCCATATGTCCATGTTGAACTTTTTGAAGGTCGTACAGTTGAGCAAAAAGCTATAATTGCTAAAGAAATTACTGAATC AATTTCTAAACATGCTGGAGCACCTACTTCAGCAATTCATGTCATCTTTAATGACCTTCCAGAAGGAATGCTCTATCAAG GCGGAGAAATGAAAAAGAAGAAATAA
Upstream 100 bases:
>100_bases GTCCTGCAAACGGTAAAAATGTTATTTTTGATTCGTTAAACTTTTTTCTATTTAAATATGATAAAATATGCTCATAATCA TATAGAAAAGAGAATTTATT
Downstream 100 bases:
>100_bases GTTTTCATTTGAGCCAATCAAAGCTGTCAGTAATTGATGGCTTTTTTATTTAAGCTGTCAGTAAATTTTTAGTAAATAAA CTTCTCTTGAAAAAATATTT
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MPYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFNDLPEGMLYQGGEMKKKK
Sequences:
>Translated_61_residues MPYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFNDLPEGMLYQGGEMKKKK >Mature_60_residues PYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFNDLPEGMLYQGGEMKKKK
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y574_LACLA (Q9CHZ4)
Other databases:
- EMBL: AE005176 - PIR: F86696 - RefSeq: NP_266730.1 - ProteinModelPortal: Q9CHZ4 - SMR: Q9CHZ4 - GeneID: 1114194 - GenomeReviews: AE005176_GR - KEGG: lla:L168282 - NMPDR: fig|272623.1.peg.589 - HOGENOM: HBG576657 - OMA: SISKHAG - ProtClustDB: CLSK697296 - BioCyc: LLAC272623:L168282-MONOMER - InterPro: IPR004370 - InterPro: IPR014347 - Gene3D: G3DSA:3.30.429.10
Pfam domain/function: PF01361 Tautomerase
EC number: NA
Molecular weight: Translated: 6798; Mature: 6667
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: ACT_SITE 2-2
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFNDLPEGMLYQGGEMKKK CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC K C >Mature Secondary Structure PYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFNDLPEGMLYQGGEMKKK CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471