Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yfgF
Identifier: 15672550
GI number: 15672550
Start: 563253
End: 564173
Strand: Direct
Name: yfgF
Synonym: L163255
Alternate gene names: NA
Gene position: 563253-564173 (Clockwise)
Preceding gene: 15672549
Following gene: 15672557
Centisome position: 23.81
GC content: 29.75
Gene sequence:
>921_bases ATGAAAGTAACTTTAATTAAAGAACTTTTCTATCTTACCAAATCCAAAATTTATCTAGTAATTTCTGGAATAATAATCGG TTTATTGATTTTAGGCACATTCCAAGCAAGCCTTAATTTAAAAGGAGCTGAGAGTCTTTTTGTGGAGGACAAACAATCAG ATATTAATTTTCAAAAAAATATCCATAAAGATTATTCTATTTCTAATAATGGCAATCAATCTATACTTAATAATGCCACT CGCTATGATTATGAGCAATTAAATCAAGCCAACCAAGCAATCAGTTTTGTGGGATTTCCACAATTCATATTTAAATCTTA TGGTATGACAATTATTTCTTTACTTGCTGGTTTCTTTGGAGTACTTGTTGCAAACTATGATTATAAATTTGGAACCTTCA AAAGGAGACTTGGGCAACAGAGTTGGAAGATAATTTTATTAGGAAAATCTGTTGGATTAGTTGTATCATTAATTGTAATG TATTTGCTTATTTTTAGTTTGGCAGCTTGTTCTGGTGAAATTTTACACTTATTCTTTAAGTCTGAAAATGCTGGAGAATA TGGGCAATCATTGTATCCCCTTATTAATTCAGATAGTTTTTATTTACTATTTTTTAGCTTTATGATTGGATTAGCATTAG CAATGATGTGTTTTGCGTTAACTTTAGCCAGTAAACGAGCAAACCTGATAGGGAGTGCTTTTATGATTTATTTATTTATC TTACCAAATACTGGTTGCTTCGATTGGAGTAATATGACATTAAATATTTTTGCACCATTTGGTAATCATCTAGGTGTGCC ACCTCTTTCAATGACCCAAATCTCTCCTTTATTTATTTTAGTGCTATTTGTGACTTATCTTTTAATTATTCTTACTGGAG GAATGTTGATATTTTTTAAGCATACACGCTATAATATATAA
Upstream 100 bases:
>100_bases GGTCATCAATTTGAGTTTTATGAAGAGATTATTGATGATTTATATGTGATAAAAAATAAAAAAATTTTAAAGGTGGATAA AGGAGGTTTGAAAAAAATTT
Downstream 100 bases:
>100_bases GAAAAGTTACTGACAGAACTCTCATTTTAATCTGAACTAGAAATTATAGATTCAATAAATAAAAAAATCACTGACAGAAA TTTTATCAGTGACTTTTTAT
Product: ABC transporter permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAESLFVEDKQSDINFQKNIHKDYSISNNGNQSILNNAT RYDYEQLNQANQAISFVGFPQFIFKSYGMTIISLLAGFFGVLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVM YLLIFSLAACSGEILHLFFKSENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCFALTLASKRANLIGSAFMIYLFI LPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISPLFILVLFVTYLLIILTGGMLIFFKHTRYNI
Sequences:
>Translated_306_residues MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAESLFVEDKQSDINFQKNIHKDYSISNNGNQSILNNAT RYDYEQLNQANQAISFVGFPQFIFKSYGMTIISLLAGFFGVLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVM YLLIFSLAACSGEILHLFFKSENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCFALTLASKRANLIGSAFMIYLFI LPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISPLFILVLFVTYLLIILTGGMLIFFKHTRYNI >Mature_306_residues MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAESLFVEDKQSDINFQKNIHKDYSISNNGNQSILNNAT RYDYEQLNQANQAISFVGFPQFIFKSYGMTIISLLAGFFGVLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVM YLLIFSLAACSGEILHLFFKSENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCFALTLASKRANLIGSAFMIYLFI LPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISPLFILVLFVTYLLIILTGGMLIFFKHTRYNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34417; Mature: 34417
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAESLFVEDKQSDINFQKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHH IHKDYSISNNGNQSILNNATRYDYEQLNQANQAISFVGFPQFIFKSYGMTIISLLAGFFG CCCCCCCCCCCCHHHHCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVMYLLIFSLAACSGEILHLFFK HHHHCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE SENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCFALTLASKRANLIGSAFMIYLFI CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISPLFILVLFVTYLLIILTGGMLIFFK CCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE HTRYNI CCCCCC >Mature Secondary Structure MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAESLFVEDKQSDINFQKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHH IHKDYSISNNGNQSILNNATRYDYEQLNQANQAISFVGFPQFIFKSYGMTIISLLAGFFG CCCCCCCCCCCCHHHHCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVMYLLIFSLAACSGEILHLFFK HHHHCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE SENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCFALTLASKRANLIGSAFMIYLFI CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISPLFILVLFVTYLLIILTGGMLIFFK CCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE HTRYNI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA