Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ps209
Identifier: 15672493
GI number: 15672493
Start: 506969
End: 507394
Strand: Direct
Name: ps209
Synonym: L106963
Alternate gene names: NA
Gene position: 506969-507394 (Clockwise)
Preceding gene: 15672492
Following gene: 15672494
Centisome position: 21.43
GC content: 37.32
Gene sequence:
>426_bases ATGGCAACAATAGACGAGCAGTTGAACGTACGCACAGAAATCGAGCAAGCAGTCGCAAAGCAATGCGATTATACAGAATT TAACCCAGTATTTGAAGATTTATTTTTCTCTCTTAACTGGCTGGAAGAACAAGACGGTTTGAAATTAGAAAAATATGATA TCTATAAAGCGTTAATGACCGCTTATAGTGTGGGATTTAATCGCGGTAAAAAAGCGCACAAACCTACAAAATGGCTAGAA AAAGAAACCGAAGAATTTGAAGATTATTGGCAACTCTATAACACTGTAAAAAATCAGGCTATTAAAGATATATCAGGCGG AAGCGAGGTAAGACAAAGCCGTGAATTTAATTCTTTGGTAACTCGTAGAATGTACGAGGCAGGAATGGCAGAGGAAAAGA AAAACTGGACTTCTTGGGATAAGTAA
Upstream 100 bases:
>100_bases CTTAATGAGTATGTCTACCGCTTGTTTGACGGTCAATCAGTTGTGACTTTCACAACTTTAGAAAATGACATTCAAGTAGA AATGATTAAGGGGTAAGAAA
Downstream 100 bases:
>100_bases GGGGTCAAGGCAAACTTTTATCAGAGGATTGAAAATGCAAAATATTATTAGAGCTTGCCCTTATGTGGCTGGTATTGATA GCGTAGGGTTGCGAAGTTTA
Product: prophage ps2 protein 09
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQDGLKLEKYDIYKALMTAYSVGFNRGKKAHKPTKWLE KETEEFEDYWQLYNTVKNQAIKDISGGSEVRQSREFNSLVTRRMYEAGMAEEKKNWTSWDK
Sequences:
>Translated_141_residues MATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQDGLKLEKYDIYKALMTAYSVGFNRGKKAHKPTKWLE KETEEFEDYWQLYNTVKNQAIKDISGGSEVRQSREFNSLVTRRMYEAGMAEEKKNWTSWDK >Mature_140_residues ATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQDGLKLEKYDIYKALMTAYSVGFNRGKKAHKPTKWLEK ETEEFEDYWQLYNTVKNQAIKDISGGSEVRQSREFNSLVTRRMYEAGMAEEKKNWTSWDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16760; Mature: 16629
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQDGLKLEKYDIYKALMT CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AYSVGFNRGKKAHKPTKWLEKETEEFEDYWQLYNTVKNQAIKDISGGSEVRQSREFNSLV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TRRMYEAGMAEEKKNWTSWDK HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQDGLKLEKYDIYKALMT CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AYSVGFNRGKKAHKPTKWLEKETEEFEDYWQLYNTVKNQAIKDISGGSEVRQSREFNSLV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TRRMYEAGMAEEKKNWTSWDK HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA