Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yeiF
Identifier: 15672471
GI number: 15672471
Start: 486329
End: 486871
Strand: Direct
Name: yeiF
Synonym: L86338
Alternate gene names: NA
Gene position: 486329-486871 (Clockwise)
Preceding gene: 15672470
Following gene: 15672472
Centisome position: 20.56
GC content: 40.7
Gene sequence:
>543_bases ATGGATTTAGAAAAGCTTAAAAAAGACACACAAGTCATTATCGATGATGTCATAAAACAAACAGAAATTAAAGCTGGTCA AGTCTTTGTTCTTGGTTTATCTTCATCAGAAGTAAATGGTGGTTTAATTGGCCATGCCAGTTCTAGTGAAATCGGTCAGG TCATTGTTTCTGTCATACACAAGACATTGTCAGACAAAGGAATCTATCTGGCGGTCCAAGCATGTGAACATCTTAATCGT GCCTTACTCATTGAAGAGGAATTAGCCGAAAAAAAAGACTGGGAAATCGTTTCTGTGATTCCGCAACTCCACGCTGGTGG AAGTGGTCAAGTTGCCGCCTACCAACTCTTTAAATCTCCAGTTGAGGTAGAACATATTGTTGCCAACGCCGGTTTAGATA TTGGTGATACTAGTATTGGAATGCACGTAAAACACGTCCAAATTCCCGTTCGCCCAATTTTAAGAGAACTTGGTGGCGCT CATGTAACAGCTCTTAAATCACGTCCTAAACTCATTGGTGGAGAACGTGCGAGGTACAAATAA
Upstream 100 bases:
>100_bases TCAGCCATTGCGGGACTTTGGGTAAATATTATTCAAGTTGTGGTTGGCTTTGCTTTAGCAAAAGTCTTGAGCCCGCTCAT TGAAAGGACAGGTATTTTAA
Downstream 100 bases:
>100_bases ATGAAAGAGATGTTAATCATGACCCCAGGTCCAACTGAGGTGGCTGAAAATGTACGATTAGCAAGAGCAAAGGCAACAAC GAATCCGGATATTGATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIGHASSSEIGQVIVSVIHKTLSDKGIYLAVQACEHLNR ALLIEEELAEKKDWEIVSVIPQLHAGGSGQVAAYQLFKSPVEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGA HVTALKSRPKLIGGERARYK
Sequences:
>Translated_180_residues MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIGHASSSEIGQVIVSVIHKTLSDKGIYLAVQACEHLNR ALLIEEELAEKKDWEIVSVIPQLHAGGSGQVAAYQLFKSPVEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGA HVTALKSRPKLIGGERARYK >Mature_180_residues MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIGHASSSEIGQVIVSVIHKTLSDKGIYLAVQACEHLNR ALLIEEELAEKKDWEIVSVIPQLHAGGSGQVAAYQLFKSPVEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGA HVTALKSRPKLIGGERARYK
Specific function: Unknown
COG id: COG4475
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0340 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006340 - ProDom: PD102102 [H]
Pfam domain/function: PF04260 DUF436 [H]
EC number: NA
Molecular weight: Translated: 19452; Mature: 19452
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIGHASSSEIGQVIVSVIH CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHH KTLSDKGIYLAVQACEHLNRALLIEEELAEKKDWEIVSVIPQLHAGGSGQVAAYQLFKSP HHHCCCCEEEEEHHHHHHHHHEEEHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCC VEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGAHVTALKSRPKLIGGERARYK HHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIGHASSSEIGQVIVSVIH CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHH KTLSDKGIYLAVQACEHLNRALLIEEELAEKKDWEIVSVIPQLHAGGSGQVAAYQLFKSP HHHCCCCEEEEEHHHHHHHHHEEEHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCC VEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGAHVTALKSRPKLIGGERARYK HHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA