Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi120
Identifier: 15672437
GI number: 15672437
Start: 458873
End: 459292
Strand: Direct
Name: pi120
Synonym: L58858
Alternate gene names: 15672437
Gene position: 458873-459292 (Clockwise)
Preceding gene: 15672436
Following gene: 15672438
Centisome position: 19.4
GC content: 39.05
Gene sequence:
>420_bases ATGACAAGAGGATTTAAAAAACTAGACGAAAATGCGACTATTCCAGAACGAGCGACAGAACATAGCGCAGGATATGACAT TTCCGCAAGTGAAACAGTTACGATTCAACCTGATGAAATTAAAATGGTAAGCACAGGGCTAGCTGTTCAACTTGGAGATG ATGAAGTATTGAAATTATACGACCGTTCAAGTAATCCAGTTAAGCGTGGCATTGCATTGATTAATTCAGTAGGAATTATC GATTCAGATTACTATCCGCAAGAATTTAAAGGCTTATTTATGAACATCTCAAAAGAGCCTGTAACCATTTCTAAAGGTCA AAGAATAATGCAAGGGGTATTTGTCAAATACCTTACAACAGACGATGACAACGCAAACGGAAAGCGAACAGGCGGTTTTG GTAGCACTGGGGAGTTGTGA
Upstream 100 bases:
>100_bases CGCATTCTATTGGCACTGCATGGAAGTTAACCTTCACCCAGCAAGAAATCGACAGCATGCAAACTGGGAGCTATGAGCTT GTGCCTGTGGAGGACGGAGA
Downstream 100 bases:
>100_bases TGGACAATAAAAGAATTTCTGAAATCGTTGAAGAAGAAATGATAAAGCAAGATGCAAACAGATATCGTGATATGAGGAAA ATTCTCACGATTCCGAAAAG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLYDRSSNPVKRGIALINSVGII DSDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTTDDDNANGKRTGGFGSTGEL
Sequences:
>Translated_139_residues MTRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLYDRSSNPVKRGIALINSVGII DSDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTTDDDNANGKRTGGFGSTGEL >Mature_138_residues TRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLYDRSSNPVKRGIALINSVGIID SDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTTDDDNANGKRTGGFGSTGEL
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Escherichia coli, GI1790071, Length=133, Percent_Identity=35.3383458646617, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15211; Mature: 15080
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCEEEEE DRSSNPVKRGIALINSVGIIDSDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTT CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCEECCCCHHHHHHHHEEEEEC DDDNANGKRTGGFGSTGEL CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCEEEEE DRSSNPVKRGIALINSVGIIDSDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTT CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCEECCCCHHHHHHHHEEEEEC DDDNANGKRTGGFGSTGEL CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]