Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi111
Identifier: 15672428
GI number: 15672428
Start: 453010
End: 453816
Strand: Direct
Name: pi111
Synonym: L53019
Alternate gene names: 15672428
Gene position: 453010-453816 (Clockwise)
Preceding gene: 15672427
Following gene: 15672429
Centisome position: 19.15
GC content: 36.31
Gene sequence:
>807_bases ATGTCAAATCAAATCACTAAAACGCAACAAACTCTTAAAAGCCCAGAGGTAAAAAAGAAGTTTGAAGAAGTGCTAGGCAA AAAAACGGAAGGTTTCGTTGCAAGTTTACTATCAGTAGTTGGTAATTCTAATTTAAAAAATGCTGATGCAAATAGCGTTA TGACTGCAGCAATGAAAGCAGCTACTCTTGATTTACCAATTGAACCAAGTCTTGGATTTGCTTATGTAATTCCTTATGGG AGAGAAGCACAATTTCAAATTGGTTATAAAGGGTTTATTCAATTAGCTTTACGAAGCGGCCAATTGACTGGACTTAATTG TGGAATTGTATATGAAAGTCAATTTGTAAGCTATGATCCACTTTTTGAAGAATTAGAACTTGATTTTAGTCAGCAAGCAA GTGGAGATGCAGTTGGATATTTCGCAAGTATGAAATTAGCTAATGGATTTAAAAAAGTTACTTACTGGTCAAAAGAGCAA GTCTTGGCGCACAAGAAAAAGTTTGTCAAATCAGCTAATGGTCCATGGCGCGACCACTTTGATGCAATGGCTCAAAAAAC AGTTTTAAAAGCCATGCTTACTAAATATGCCCCAGCATCTATTGAATCAAAAATGATTCAAACGGCAATCACAGAAGATG ATAGTGAGCGTTTTGAAAATGCTAAAGATGTTACGCCAGATGAGCCGGTAATTTCAATTGATGAATCAATGACTTCTGAA GTTTCACAGAATGAACCTGCTACAGAAAGCCAGGAACAACTTCCAGAAGATGAAGTAGAAGAGTTGTTCCCGATTGGTAA AAGCTGA
Upstream 100 bases:
>100_bases AAAAAAGCCCTGCATGGCACGCAGAGCAAGTAGGAAATTCGCCAAAACTTCTACTTAAATTATACCACGAATGCTAAAAA ATTAGAAACGGAGAATTTAA
Downstream 100 bases:
>100_bases TGAATAAAAGATTAAGTTTTTCAAGTTTAAAAGCATTCTCTGATTGTGAAGCCGAAGCTGTTGCAGTTATGGCTGGAGAC TGGGATAGGCAGGCTACTTT
Product: recombinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSNLKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYG REAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDPLFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQ VLAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERFENAKDVTPDEPVISIDESMTSE VSQNEPATESQEQLPEDEVEELFPIGKS
Sequences:
>Translated_268_residues MSNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSNLKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYG REAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDPLFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQ VLAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERFENAKDVTPDEPVISIDESMTSE VSQNEPATESQEQLPEDEVEELFPIGKS >Mature_267_residues SNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSNLKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYGR EAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDPLFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQV LAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERFENAKDVTPDEPVISIDESMTSEV SQNEPATESQEQLPEDEVEELFPIGKS
Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]
COG id: COG3723
COG function: function code L; Recombinational DNA repair protein (RecE pathway)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787611, Length=181, Percent_Identity=30.939226519337, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004590 - InterPro: IPR018330 [H]
Pfam domain/function: PF03837 RecT [H]
EC number: NA
Molecular weight: Translated: 29652; Mature: 29521
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSNLKNADANSVMTAAMKA CCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATLDLPIEPSLGFAYVIPYGREAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDP HHCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH LFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQVLAHKKKFVKSANGPWRDHF HHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH DAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERFENAKDVTPDEPVISIDESMTSE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCHHHHHH VSQNEPATESQEQLPEDEVEELFPIGKS HHCCCCCCCHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure SNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSNLKNADANSVMTAAMKA CCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATLDLPIEPSLGFAYVIPYGREAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDP HHCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH LFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQVLAHKKKFVKSANGPWRDHF HHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH DAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERFENAKDVTPDEPVISIDESMTSE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCHHHHHH VSQNEPATESQEQLPEDEVEELFPIGKS HHCCCCCCCHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895 [H]