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The map label for this gene is ptcC

Identifier: 15672398

GI number: 15672398

Start: 420905

End: 422074

Strand: Direct

Name: ptcC

Synonym: L20847

Alternate gene names: 15672398

Gene position: 420905-422074 (Clockwise)

Preceding gene: 30023989

Following gene: 15672399

Centisome position: 17.79

GC content: 40.6

Gene sequence:

>1170_bases
ATGAACAAAATCAAATTGGGCCCACTCTTTTTACAAATTAATAATGCTTCATTTGGTATTATGGCCTTGCTTGCCGTATT
CGGTATTGCTTACGCGTGGGTTCGAGATGCAGGTTATGAAGGAGTTCCTGCTGGTTTAACTGGTATTATCGTTCACATCT
TGTTGCAACCAGACACAATTCATCAAGTAACATCTGTTACTGACCCAACTAAAGTTTCAACTGCTTATCAAGTAGGGGGA
GTAATTGACCGAGCTTGGTTAGGTGGGAAAGGGATGGTTCTTTCAATCATCGTCGGACTCTTAGTCGGTTGGATTTACAC
TGGCTTTATGCGTCGTAACATCACAATTAAAATGCCAGAACAAGTTCCAGAAAACGTTGCGGCATCATTCACTTCACTTG
TTCCTGCAGGAGCAATCATTGCCTTAGCTGGAGTTGTTCACGGAATTACAACAATCGGATTCAACACAACTTTCATTGAA
TTAGTTTATAAATGGATTCAAACTCCATTACAACACGTAACTGATGGTCCTGTCGGCGTCTTCGTTATTGCCTTTATGCC
AGTATTTATCTGGTGGTTCGGTGTTCACGGAGCGACAATCATCGGTGGGATTATGGGACCATTGCTTCAAGCCAACTCTG
CTGACAATGCTGCCCTCTATAAAGCAGGACATCTCAGTCTTTCAAATGGAGCCCACATCGTTACACAATCATTCATGGAC
CAATACTTGACAGTTACTGGTTCTGGTTTGACCATTGGTTTGGTTATCTTCCTCTTAGTGAGTGCAAAATCAGTTCAAGG
TAAAACTTTAGGACGTATGGAAATTGGACCTGCAGTGTTCAATATTAATGAACCAATTCTCTTTGGTCTTCCTATTGTCT
TAAATCCTATTCTTGCAATTCCATTTATCTTAGCACCATTGATTTCAGGAATCTTGACTTACTTAGTGATTTATCTAGGA
ATCATTCCACCATTTAACGGAGCTTATGTTCCATGGACAACACCTGCAGTTCTTTCAGGATACCTTGTAGGTGGCTGGCA
AGGTATGGTTTGGCAAGTTATTATCCTTGCATTGACATCACTTCTCTACTGGCCATTTGCCAAAGCTTATGACAATATTC
TTCTTAAAGAAGAAGCTGAAACAGAAGCTGAAATTAATGCTGCTGAATAA

Upstream 100 bases:

>100_bases
ACCCGTGCAGTCACGGCAATCAAAAATGGTATGATTTATCATTATTGGTTCAGTATTCTTGATTCTTGGTCAATTGCCAT
TCCAAGCAGGCCAAGACTTC

Downstream 100 bases:

>100_bases
TAGCAAATTTTAGATGAGCTCAAGAATTCTTGAGCTTATCTTATTAAAAATGTTAATTCTAAAAATTTAAAAGGAGAAAT
TATGACTTTAAAAAAAGACT

Product: cellobiose-specific PTS system IIC component

Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]

Alternate protein names: Glucomannan utilization protein C; PTS system oligo-beta-mannoside-specific EIIC component [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPAGLTGIIVHILLQPDTIHQVTSVTDPTKVSTAYQVGG
VIDRAWLGGKGMVLSIIVGLLVGWIYTGFMRRNITIKMPEQVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIE
LVYKWIQTPLQHVTDGPVGVFVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAALYKAGHLSLSNGAHIVTQSFMD
QYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIGPAVFNINEPILFGLPIVLNPILAIPFILAPLISGILTYLVIYLG
IIPPFNGAYVPWTTPAVLSGYLVGGWQGMVWQVIILALTSLLYWPFAKAYDNILLKEEAETEAEINAAE

Sequences:

>Translated_389_residues
MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPAGLTGIIVHILLQPDTIHQVTSVTDPTKVSTAYQVGG
VIDRAWLGGKGMVLSIIVGLLVGWIYTGFMRRNITIKMPEQVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIE
LVYKWIQTPLQHVTDGPVGVFVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAALYKAGHLSLSNGAHIVTQSFMD
QYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIGPAVFNINEPILFGLPIVLNPILAIPFILAPLISGILTYLVIYLG
IIPPFNGAYVPWTTPAVLSGYLVGGWQGMVWQVIILALTSLLYWPFAKAYDNILLKEEAETEAEINAAE
>Mature_389_residues
MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPAGLTGIIVHILLQPDTIHQVTSVTDPTKVSTAYQVGG
VIDRAWLGGKGMVLSIIVGLLVGWIYTGFMRRNITIKMPEQVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIE
LVYKWIQTPLQHVTDGPVGVFVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAALYKAGHLSLSNGAHIVTQSFMD
QYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIGPAVFNINEPILFGLPIVLNPILAIPFILAPLISGILTYLVIYLG
IIPPFNGAYVPWTTPAVLSGYLVGGWQGMVWQVIILALTSLLYWPFAKAYDNILLKEEAETEAEINAAE

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788032, Length=382, Percent_Identity=30.3664921465969, Blast_Score=175, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003352
- InterPro:   IPR004796
- InterPro:   IPR004501 [H]

Pfam domain/function: PF02378 PTS_EIIC [H]

EC number: NA

Molecular weight: Translated: 41701; Mature: 41701

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS51105 PTS_EIIC_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPAGLTGIIVHILLQPDTI
CCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
HQVTSVTDPTKVSTAYQVGGVIDRAWLGGKGMVLSIIVGLLVGWIYTGFMRRNITIKMPE
HHHHCCCCCCHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCH
QVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIELVYKWIQTPLQHVTDGPVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
FVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAALYKAGHLSLSNGAHIVTQSFMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHH
QYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIGPAVFNINEPILFGLPIVLNPILAI
HHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEECCCCCEECCHHHHHHHHHH
PFILAPLISGILTYLVIYLGIIPPFNGAYVPWTTPAVLSGYLVGGWQGMVWQVIILALTS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHCCHHHHHHHHHHHHHHH
LLYWPFAKAYDNILLKEEAETEAEINAAE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPAGLTGIIVHILLQPDTI
CCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
HQVTSVTDPTKVSTAYQVGGVIDRAWLGGKGMVLSIIVGLLVGWIYTGFMRRNITIKMPE
HHHHCCCCCCHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCH
QVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIELVYKWIQTPLQHVTDGPVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
FVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAALYKAGHLSLSNGAHIVTQSFMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHH
QYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIGPAVFNINEPILFGLPIVLNPILAI
HHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEECCCCCEECCHHHHHHHHHH
PFILAPLISGILTYLVIYLGIIPPFNGAYVPWTTPAVLSGYLVGGWQGMVWQVIILALTS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHCCHHHHHHHHHHHHHHH
LLYWPFAKAYDNILLKEEAETEAEINAAE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]

Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]