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The map label for this gene is ydgE

Identifier: 15672340

GI number: 15672340

Start: 363312

End: 363638

Strand: Direct

Name: ydgE

Synonym: L163307

Alternate gene names: 15672340

Gene position: 363312-363638 (Clockwise)

Preceding gene: 15672339

Following gene: 15672341

Centisome position: 15.36

GC content: 30.89

Gene sequence:

>327_bases
ATGGACGACATCATGGAAAGCATTGAGAAAAAAGAAATTCGCCCCCTTTTTATAAAGGAGCGAATCGCAGTTTATGTTTA
TTGCTATTCATATAAAGGAACAAGACAATTAAGTAAATTTGGAGATGTGGTTTATACAAGCCAAAAATCAAATTATAGTT
TACTCTATGTCAATAATGAAAATCTTTCAGATTTATTGAGTAAATTAAAAGATTTGAAATTTGTTAAAAAGGTACGTGTG
GGTCATATTAAAGAACTTGACCAAAACTTTTCTGAAGCTTTTGCTCAAACTAATCTTGCCGTTAAAGAGGAAATTGAGCG
CTTGTAA

Upstream 100 bases:

>100_bases
GACCTTCAACAAATTTTGACAGCTTTGACTAAGAAAATTACAAATAGTATTTCGGAACAGATTTATGTTGATGAGAATTT
ACCGTTGAAAGGAGGGCAAC

Downstream 100 bases:

>100_bases
GTAAGGGAATAAAAGTGAGCTCACGTGTCAATAATGTAATTGGTATTGTGTATTATTTGAGTGAGCAGACTTTTTTTGTT
AATATAGTAAAAAAAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVVYTSQKSNYSLLYVNNENLSDLLSKLKDLKFVKKVRV
GHIKELDQNFSEAFAQTNLAVKEEIERL

Sequences:

>Translated_108_residues
MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVVYTSQKSNYSLLYVNNENLSDLLSKLKDLKFVKKVRV
GHIKELDQNFSEAFAQTNLAVKEEIERL
>Mature_108_residues
MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVVYTSQKSNYSLLYVNNENLSDLLSKLKDLKFVKKVRV
GHIKELDQNFSEAFAQTNLAVKEEIERL

Specific function: Unknown

COG id: COG4471

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0298 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016979 [H]

Pfam domain/function: PF09902 DUF2129 [H]

EC number: NA

Molecular weight: Translated: 12707; Mature: 12707

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVVYTSQKSNYSLLYVNNE
CCHHHHHHHHHCCCHHHHHHHEEEEEEEECCCCHHHHHHHCCEEEECCCCCEEEEEEECC
NLSDLLSKLKDLKFVKKVRVGHIKELDQNFSEAFAQTNLAVKEEIERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVVYTSQKSNYSLLYVNNE
CCHHHHHHHHHCCCHHHHHHHEEEEEEEECCCCHHHHHHHCCEEEECCCCCEEEEEEECC
NLSDLLSKLKDLKFVKKVRVGHIKELDQNFSEAFAQTNLAVKEEIERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]