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The map label for this gene is recA

Identifier: 15672336

GI number: 15672336

Start: 358813

End: 359976

Strand: Direct

Name: recA

Synonym: L0260

Alternate gene names: 15672336

Gene position: 358813-359976 (Clockwise)

Preceding gene: 15672335

Following gene: 15672339

Centisome position: 15.17

GC content: 39.69

Gene sequence:

>1164_bases
TTGGCAACAAAGAAAAAAACAAATTTTGATGATATTACCAAAAAATATGGCGCTGAACGTGACAAAGCTTTGGCAGATGC
ACTTGCTCTGATTGAAAAAGACTTTGGGAAAGGTTCACTTATGCGACTTGGCGAAGCAGCCAACCAGAAAGTGTCAGTAG
TAAGTTCAGGCTCACTTGCACTTGATATTGCGCTTGGTGCAGGTGGATATCCTAAAGGACGTATCGTTGAAATCTACGGA
CCAGAATCTTCTGGTAAAACAACAGTCGCTCTTCATGCCGTTGCAGCGGTTCAAAAAGAAGGTGGAATTGCAGCCTTTAT
CGATGCTGAAAATGCGCTTGACCCAGAATATGCAAAAGCGCTCGGTGTCAATATCGATGAACTTTTACTTTCACAACCAG
ACTATGGTGAACAAGGGCTTCAAATTGCTGAAAAATTGATTACATCTGGTGCAGTTGACTTAGTTGTTATTGACTCAGTT
GCAGCTTTGGTACCTAAAGCCGAAATTGATGGTGAAATTGGTGACAGTTCAGTTGGGCTTCAAGCTCGTATGATGTCACA
AGCCATGCGTAAACTTGCAGGACATATTAATAAAACAAAAACAACAGCTATTTTCATCAACCAATTGCGTGAAAAAGTTG
GGGTTATGTTTGGTTCGCCAGAAACAACACCTGGTGGTCGTGCATTGAAATTCTACGCTTCTGTACGTCTTGATGTACGT
GGTTCAACAAAAATCGAAGAAGGTTCTGGAGATAACAAGACCCAAATCGGTAAAATCACAAAAATCAAAGTCGTTAAAAA
TAAAGTGGCTCCACCATTCAAGGTTGCTCTCGTAGATATCATGTTCGGTGAAGGAATTTCAAGAACCGGTGAACTTTTAA
ACATTGCTGTTGATGAAGGAATCATCAAAAAATCAGGCGCTTGGTTTGCTTACAATGACGAAAAAATTGGTCAAGGAGCA
GAAAAAGCGAAGAACTATCTCAAAGAACATCAAGAAATCTTTGATGAAATTGACCATAAAGTTCGTACCGCACACGGTCT
TCTTGATGAAGCAGAAGTAGCAGAAACTACAGAAGATACTTCAACAAAAGCTAAGGCAACTAAAGCTAAAAAAGAAGAAA
AAGTAGTCGAAACTGAAGAAATTGAACTCGAACTTGAAGATTAA

Upstream 100 bases:

>100_bases
AAAGTTAATAAAAAAACGTATAGATAGAATATAGGGGCTTATAAAAAATCCTGAAAAATGCTATAATTAAACAATAAATA
AAGAATAACGGAGATAAAAT

Downstream 100 bases:

>100_bases
AAAAACAGCTGATTATTCAGCTGTTTTTATTTTTTTAAAGAAAGTAAATAGTCCAAAAATAAGAACCCAAATCACAGAAC
CAATGGCCGGAACAATTGTA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYG
PESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV
AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGA
EKAKNYLKEHQEIFDEIDHKVRTAHGLLDEAEVAETTEDTSTKAKATKAKKEEKVVETEEIELELED

Sequences:

>Translated_387_residues
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYG
PESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV
AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGA
EKAKNYLKEHQEIFDEIDHKVRTAHGLLDEAEVAETTEDTSTKAKATKAKKEEKVVETEEIELELED
>Mature_386_residues
ATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSVA
ALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVRG
STKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGAE
KAKNYLKEHQEIFDEIDHKVRTAHGLLDEAEVAETTEDTSTKAKATKAKKEEKVVETEEIELELED

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=350, Percent_Identity=59.7142857142857, Blast_Score=403, Evalue=1e-113,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA1_LACLA (P0C2U4)

Other databases:

- EMBL:   AE005176
- PIR:   B86669
- RefSeq:   NP_266510.1
- ProteinModelPortal:   P0C2U4
- SMR:   P0C2U4
- GeneID:   1113965
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L0260
- NMPDR:   fig|272623.1.peg.362
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 41478; Mature: 41347

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLA
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEE
LDIALGAGGYPKGRIVEIYGPESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKA
EEEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSVAALVPKAEIDGEIGDSSVGL
HCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHCCCCCCCCCCCH
QARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEEC
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEG
CCCEECCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHEEHHHHCCCCCCCCCEEEEEECCC
IIKKSGAWFAYNDEKIGQGAEKAKNYLKEHQEIFDEIDHKVRTAHGLLDEAEVAETTEDT
EEECCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
STKAKATKAKKEEKVVETEEIELELED
CHHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure 
ATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLA
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEE
LDIALGAGGYPKGRIVEIYGPESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKA
EEEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSVAALVPKAEIDGEIGDSSVGL
HCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHCCCCCCCCCCCH
QARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEEC
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEG
CCCEECCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHEEHHHHCCCCCCCCCEEEEEECCC
IIKKSGAWFAYNDEKIGQGAEKAKNYLKEHQEIFDEIDHKVRTAHGLLDEAEVAETTEDT
EEECCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
STKAKATKAKKEEKVVETEEIELELED
CHHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471