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The map label for this gene is ydaF

Identifier: 15672291

GI number: 15672291

Start: 308509

End: 308859

Strand: Direct

Name: ydaF

Synonym: L108503

Alternate gene names: 15672291

Gene position: 308509-308859 (Clockwise)

Preceding gene: 15672287

Following gene: 15672292

Centisome position: 13.04

GC content: 35.9

Gene sequence:

>351_bases
ATGGCAGAAATACCAAAGGAAATGTTACGCGCCCAAACCAATGTCATTTTGCTCAATGTCTTAAAACAAGGGGATAATTA
TGTTTATGGCATTATCAAGCAAGTCAAAGAAGCCTCAAATGGAGAAATGGAGCTTAATGAAGCCACGCTCTATACAATCT
TTAAAAGACTTGAAAAGGATGGGATTATCAGTTCTTATTGGGGAGACGAAAGCCAAGGTGGCCGTCGTAAATACTACCGC
TTGACAGAAATTGGTCATGAAAATATGCGACTTGCTTTTGAATCTTGGTCTAGAGTCGATGAAATTATTGAAAATTTAGA
AGCAAATAAAAAAGATGAATCTAATAAATAA

Upstream 100 bases:

>100_bases
GTCAAAAATAAAATAATTATATAAAAAATTCAAGTACCTTGACTTACATAGTAATGTGAAGTATAATATACTTTGTTTAA
AATGATAGAAAGGAAAAAGA

Downstream 100 bases:

>100_bases
TTTCCAATTAAAATTTAAGTTACAAAATAAGGGATGAAGGTAAAAAAATATTCGTCGCAAATTGTTGACTTAAACTTTGA
AAAGCGTTACAATATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYR
LTEIGHENMRLAFESWSRVDEIIENLEANKKDESNK

Sequences:

>Translated_116_residues
MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYR
LTEIGHENMRLAFESWSRVDEIIENLEANKKDESNK
>Mature_115_residues
AEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYRL
TEIGHENMRLAFESWSRVDEIIENLEANKKDESNK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 13505; Mature: 13374

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHC
GIISSYWGDESQGGRRKYYRLTEIGHENMRLAFESWSRVDEIIENLEANKKDESNK
CCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKD
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHC
GIISSYWGDESQGGRRKYYRLTEIGHENMRLAFESWSRVDEIIENLEANKKDESNK
CCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA