Click here to switch to the map view.

The map label for this gene is ycjH

Identifier: 15672280

GI number: 15672280

Start: 295201

End: 295989

Strand: Reverse

Name: ycjH

Synonym: L95210

Alternate gene names: NA

Gene position: 295989-295201 (Counterclockwise)

Preceding gene: 15672288

Following gene: 15672279

Centisome position: 12.51

GC content: 34.85

Gene sequence:

>789_bases
ATGAAAAATTTAACTTTTACGGTCAGCATGTCTGACCTTGGTTTAGAAATTCGTCTTCCATCAACTGCCTTTTTACGTAT
TTTTGATCAGAATAATGCACGTTTTGATTTGCAAAATGATGAGCTTTTCTTTTTACTAAAAAAAGGGCAGATTAAAATGA
TTGCCAATGATTTAAAATTAATTCCTAAGTTAGAATTTGATAAAGTCGTGATTTTAAATATGGCTGCCTATGATTTAGAG
CTGGAATATCTAACGCAATATTTAGTTAATTTGGCTGAGGAAGCTGGCATTATTTTACGTGATAAAGCCGAGCCAATTAA
AATTACAAGCAATATCGAAAAAGCTTGTGCCACTTCTGCTGACGAGTTTTTGACTGCTTTAACTGCTTTTGGCATTAAAT
TAGAAAAGAAAAAAGCTTTTTCTCCTAAAGCACAACATCGCTGGAAAAAAGGACTTTCTGAAGTTGAATTTTTTGTTAAT
CGTTCCGACAGTAAAGCGACCATTATTTGGGAAAAATCCAATCAACTTGTGATAAAAGCCGGAGCAAAAATCTCCGAAAG
CGGTGGAATGAAATCTGATGGTACACCAGGTTTAGCCTATCGTTTTACACAGACTTTAAGAGAAGAACAAAAAGCCAATT
GGGATGCTAAAACATTCACAACTACTGAGGATATTGTCTTAAAATCAGTCAATGAAGTGGGACATTTCCTTTACTTCGCT
GGAACAAATAGCTGGTTACAATTGGTCGATAAAGAAGGACGGACAATTCATGAATTATCTGTGGTCTAG

Upstream 100 bases:

>100_bases
AAAATACAAAAAAACAGATTACATTGTTTGCATATACCAAACTTTAGCTTGATGATGTATTGTTTGATAAGGCTGTCAAA
CTTTCTGCTATAATAAAGTT

Downstream 100 bases:

>100_bases
TAATTCTTACTAAAAGATGACAATAGGACCCCAATCTGTGAAGTTCCCCTTGCTAATCTTTTTTTGTGGAGTTATAATAT
AGCAAAAGGAGGCGGTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFFLLKKGQIKMIANDLKLIPKLEFDKVVILNMAAYDLE
LEYLTQYLVNLAEEAGIILRDKAEPIKITSNIEKACATSADEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVN
RSDSKATIIWEKSNQLVIKAGAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKTFTTTEDIVLKSVNEVGHFLYFA
GTNSWLQLVDKEGRTIHELSVV

Sequences:

>Translated_262_residues
MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFFLLKKGQIKMIANDLKLIPKLEFDKVVILNMAAYDLE
LEYLTQYLVNLAEEAGIILRDKAEPIKITSNIEKACATSADEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVN
RSDSKATIIWEKSNQLVIKAGAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKTFTTTEDIVLKSVNEVGHFLYFA
GTNSWLQLVDKEGRTIHELSVV
>Mature_262_residues
MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFFLLKKGQIKMIANDLKLIPKLEFDKVVILNMAAYDLE
LEYLTQYLVNLAEEAGIILRDKAEPIKITSNIEKACATSADEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVN
RSDSKATIIWEKSNQLVIKAGAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKTFTTTEDIVLKSVNEVGHFLYFA
GTNSWLQLVDKEGRTIHELSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29639; Mature: 29639

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFFLLKKGQIKMIANDLKL
CCCEEEEEEEHHCCEEEECCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEEECCHHH
IPKLEFDKVVILNMAAYDLELEYLTQYLVNLAEEAGIILRDKAEPIKITSNIEKACATSA
CCCCCCCCEEEEEEEEHEEEHHHHHHHHHHHHHHCCEEEECCCCCEEEECCHHHHHHCCH
DEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVNRSDSKATIIWEKSNQLVIKA
HHHHHHHHHHCEEEECCCCCCCHHHHHHHHCHHHHHHHEECCCCEEEEEEECCCEEEEEE
GAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKTFTTTEDIVLKSVNEVGHFLYFA
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCEEEEE
GTNSWLQLVDKEGRTIHELSVV
CCCHHHHHECCCCCEEEEEECC
>Mature Secondary Structure
MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFFLLKKGQIKMIANDLKL
CCCEEEEEEEHHCCEEEECCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEEECCHHH
IPKLEFDKVVILNMAAYDLELEYLTQYLVNLAEEAGIILRDKAEPIKITSNIEKACATSA
CCCCCCCCEEEEEEEEHEEEHHHHHHHHHHHHHHCCEEEECCCCCEEEECCHHHHHHCCH
DEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVNRSDSKATIIWEKSNQLVIKA
HHHHHHHHHHCEEEECCCCCCCHHHHHHHHCHHHHHHHEECCCCEEEEEEECCCEEEEEE
GAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKTFTTTEDIVLKSVNEVGHFLYFA
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCEEEEE
GTNSWLQLVDKEGRTIHELSVV
CCCHHHHHECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA