Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is tagD1
Identifier: 15672200
GI number: 15672200
Start: 219837
End: 220265
Strand: Direct
Name: tagD1
Synonym: L19816
Alternate gene names: 15672200
Gene position: 219837-220265 (Clockwise)
Preceding gene: 15672199
Following gene: 15672202
Centisome position: 9.29
GC content: 31.7
Gene sequence:
>429_bases ATGAAAGATAATGAAAAACAGAGGATTGTTCTTGTAGCAGGAACATTTGATATATTACATGAAAGTCATATCAATATGCT TCGTAATGCGCGCAATCTTGGTGATAAACTAATTGTAATGCTCTCTACAGATGAATTTAATGCCACAAAAGGTAAGAAGT CATATCAAGAGTATGATACAAGAAAATATGTCTTAGAATCCGTAAGATATGTTGACTTGGTTATTCCGGAACAATCATGG GATGATAAAGCACTTTATATTGATATGTTTGATGTTGATATATTTGCTATGGGAGATGATTGGCGAGGTAAGTTTGATTT TTTGAAGGATGAATTTCCTCATCTTAAGATAATGTATTTTCCGCGTGGTAAGATTTCCTCAAGTAAAGTTAAGGAAGAAT TAGGAAAATTATATCAAAAAAGAAAGTGA
Upstream 100 bases:
>100_bases ATAAAAGTTGGGGCCTGGACAGTTGGAGATATTAATACATTAAAATATTTGCAAAGTATTGGCGTTGATGTTTTGACTAC TAACTATTAAGGAGATATTT
Downstream 100 bases:
>100_bases CTGATTGTCCCATATAATTTTTTTGAGCGTATGCTTGGATTTTGCCATGAATATCAAAAGTACCTAAGAATAAATATTAA AAAAATCAGAAAACTAACTC
Product: glycerol-3-phosphate cytidiltransferase
Products: NA
Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK
Sequences:
>Translated_142_residues MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK >Mature_142_residues MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK
Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]
COG id: COG0615
COG function: function code MI; Cytidylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR006409 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.39 [H]
Molecular weight: Translated: 16838; Mature: 16838
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH RKYVLESVRYVDLVIPEQSWDDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYF HHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE PRGKISSSKVKEELGKLYQKRK CCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH RKYVLESVRYVDLVIPEQSWDDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYF HHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE PRGKISSSKVKEELGKLYQKRK CCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]