Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is tagD1

Identifier: 15672200

GI number: 15672200

Start: 219837

End: 220265

Strand: Direct

Name: tagD1

Synonym: L19816

Alternate gene names: 15672200

Gene position: 219837-220265 (Clockwise)

Preceding gene: 15672199

Following gene: 15672202

Centisome position: 9.29

GC content: 31.7

Gene sequence:

>429_bases
ATGAAAGATAATGAAAAACAGAGGATTGTTCTTGTAGCAGGAACATTTGATATATTACATGAAAGTCATATCAATATGCT
TCGTAATGCGCGCAATCTTGGTGATAAACTAATTGTAATGCTCTCTACAGATGAATTTAATGCCACAAAAGGTAAGAAGT
CATATCAAGAGTATGATACAAGAAAATATGTCTTAGAATCCGTAAGATATGTTGACTTGGTTATTCCGGAACAATCATGG
GATGATAAAGCACTTTATATTGATATGTTTGATGTTGATATATTTGCTATGGGAGATGATTGGCGAGGTAAGTTTGATTT
TTTGAAGGATGAATTTCCTCATCTTAAGATAATGTATTTTCCGCGTGGTAAGATTTCCTCAAGTAAAGTTAAGGAAGAAT
TAGGAAAATTATATCAAAAAAGAAAGTGA

Upstream 100 bases:

>100_bases
ATAAAAGTTGGGGCCTGGACAGTTGGAGATATTAATACATTAAAATATTTGCAAAGTATTGGCGTTGATGTTTTGACTAC
TAACTATTAAGGAGATATTT

Downstream 100 bases:

>100_bases
CTGATTGTCCCATATAATTTTTTTGAGCGTATGCTTGGATTTTGCCATGAATATCAAAAGTACCTAAGAATAAATATTAA
AAAAATCAGAAAACTAACTC

Product: glycerol-3-phosphate cytidiltransferase

Products: NA

Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW
DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK

Sequences:

>Translated_142_residues
MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW
DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK
>Mature_142_residues
MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSW
DDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK

Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]

COG id: COG0615

COG function: function code MI; Cytidylyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR006409
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.39 [H]

Molecular weight: Translated: 16838; Mature: 16838

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDT
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
RKYVLESVRYVDLVIPEQSWDDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYF
HHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
PRGKISSSKVKEELGKLYQKRK
CCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTDEFNATKGKKSYQEYDT
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
RKYVLESVRYVDLVIPEQSWDDKALYIDMFDVDIFAMGDDWRGKFDFLKDEFPHLKIMYF
HHHHHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE
PRGKISSSKVKEELGKLYQKRK
CCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]