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The map label for this gene is dinF

Identifier: 15672149

GI number: 15672149

Start: 170979

End: 172319

Strand: Reverse

Name: dinF

Synonym: L170983

Alternate gene names: 15672149

Gene position: 172319-170979 (Counterclockwise)

Preceding gene: 15672150

Following gene: 15672137

Centisome position: 7.28

GC content: 39.67

Gene sequence:

>1341_bases
ATGAAAGATTTAACTAAAGGAAATATTTTAACAGGACTTATTGCATTTACTTTGCCCTTACTTATGGGTAACTTTTTTCA
GGTCCTCTATAACACGGCAGATACTCTGATTGTCGGTCAAACCTTGGGAAAAGATGCTTTGGCTTCCGTTGGAGCGACAG
GCTCTATCAACTTTTTAATTGTCGGCTTTGCTCAAGGAATGACTGCTGGTTTGACAATTTTAACGGCCCAACGTTTCGGG
GCAAAAGATGAGTTAGCCATAAAAAAATCCTATGTCACGGGCCTCTACTTTACAATTGCGATTTCTATTTTGCTCAGCAT
ATTGTCCCTTATTTTTGTGGGACCTTTGCTTCAAGTTATGCAGACCCCAAGCCAAATTTTTGAAGGTGCCAAGACCTTTC
TAAGCATTATGTTAGGCGGAATGATTGCCACTAATCTCTACGCTTATCTGTCTAATGCTCTAAGGGCTTTGGGCGATTCT
AAAACGCCATTATATGCTTTGATTGCTGCCTCAATTTTAAATATTGCCTTTGAATATTTTGCTATTTTAGTCTTAAAATT
AGGAATTGCTGGAGCAAGTGGAGCAACAATTTTAGCCCAAATGATTTCGGTATTATTTCTTTTTTGGCACATCAAACGAA
AAGTTCCCGAATTTCAAATTTCAAAAAATTTATGGCGGCTAGATCGTGCCGAAATTGTCCATCATGCTAGACTTGGTATT
CCAATGGGCTTTCAATCAAGCATTATTGCCATCGGCTCTATCACGCTCCAAGTCGCTTTGAATAAAATGGGAACAAATGC
TGTCGCTACCCAAGCCATCGTTTCTAAAATTGACCAATTTGCGATGCTCCCGATGATTTCAATCGGCCTTGCCATGGCAA
CCTTTGGAGCACAAAATTATGGGGCTAAACAGTACAAACGAATTAATCAAGGCTTAACACGGGCTCTTACAATTGCTGTC
GGTTGGTCAATTATCTTTGCCATTATCTTAAACCTTGCTCACTTCTATTTCACCACTGCTTTCATTTCAAGTAGCCAAAC
AGCCGTTATTGAAATGTCGAGTCACTATTATCTTGTGAACGGAAGTTTCTATTGGTTGTTAGCCATTTTATTCGTTACCC
GCTCAACAATTCAAGGCTTAGGTAATGCCAAGATTCCAACATTGTGTGGCTTTGCAGAGCTTTTCATGCGGGCAGGAGTC
GCTATCATTGGTGTTCTTTTACTCAATTATACGGTAATTATCTCAAGTAATCCTGCCGCTTGGCTGGGTTCAACCTCTAT
CTTAATTCCAACAACCATCCGCATGATTAAACGTTTTAGACAAAATCAGGATTTAGCATAA

Upstream 100 bases:

>100_bases
AAGCCTTTACAAATAATTCATATTTTATCAAAAATACTATTGTAAAAACGATTAAAATGGGCTAAAATAAAGAAATCAAC
TTAGTGTATTTAGGGAAAAA

Downstream 100 bases:

>100_bases
AACCGCCACTTAGGGCGGTTTTTCTTTTAAATTTACTGACAGATTTGGTTTACACTTTCTGTCAGTAAAATATCGTTAAA
CTTATTGATAAGCTTTGGGT

Product: DinF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGKDALASVGATGSINFLIVGFAQGMTAGLTILTAQRFG
AKDELAIKKSYVTGLYFTIAISILLSILSLIFVGPLLQVMQTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDS
KTPLYALIAASILNIAFEYFAILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEFQISKNLWRLDRAEIVHHARLGI
PMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSKIDQFAMLPMISIGLAMATFGAQNYGAKQYKRINQGLTRALTIAV
GWSIIFAIILNLAHFYFTTAFISSSQTAVIEMSSHYYLVNGSFYWLLAILFVTRSTIQGLGNAKIPTLCGFAELFMRAGV
AIIGVLLLNYTVIISSNPAAWLGSTSILIPTTIRMIKRFRQNQDLA

Sequences:

>Translated_446_residues
MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGKDALASVGATGSINFLIVGFAQGMTAGLTILTAQRFG
AKDELAIKKSYVTGLYFTIAISILLSILSLIFVGPLLQVMQTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDS
KTPLYALIAASILNIAFEYFAILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEFQISKNLWRLDRAEIVHHARLGI
PMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSKIDQFAMLPMISIGLAMATFGAQNYGAKQYKRINQGLTRALTIAV
GWSIIFAIILNLAHFYFTTAFISSSQTAVIEMSSHYYLVNGSFYWLLAILFVTRSTIQGLGNAKIPTLCGFAELFMRAGV
AIIGVLLLNYTVIISSNPAAWLGSTSILIPTTIRMIKRFRQNQDLA
>Mature_446_residues
MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGKDALASVGATGSINFLIVGFAQGMTAGLTILTAQRFG
AKDELAIKKSYVTGLYFTIAISILLSILSLIFVGPLLQVMQTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDS
KTPLYALIAASILNIAFEYFAILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEFQISKNLWRLDRAEIVHHARLGI
PMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSKIDQFAMLPMISIGLAMATFGAQNYGAKQYKRINQGLTRALTIAV
GWSIIFAIILNLAHFYFTTAFISSSQTAVIEMSSHYYLVNGSFYWLLAILFVTRSTIQGLGNAKIPTLCGFAELFMRAGV
AIIGVLLLNYTVIISSNPAAWLGSTSILIPTTIRMIKRFRQNQDLA

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48298; Mature: 48298

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGKDALASVGATGSINFLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEEEE
VGFAQGMTAGLTILTAQRFGAKDELAIKKSYVTGLYFTIAISILLSILSLIFVGPLLQVM
EEECCCHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDSKTPLYALIAASILNIAFEYF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEFQISKNLWRLDRAEIVHHARLGI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSKIDQFAMLPMISIGLAMATFGAQNY
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAKQYKRINQGLTRALTIAVGWSIIFAIILNLAHFYFTTAFISSSQTAVIEMSSHYYLVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEC
GSFYWLLAILFVTRSTIQGLGNAKIPTLCGFAELFMRAGVAIIGVLLLNYTVIISSNPAA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCH
WLGSTSILIPTTIRMIKRFRQNQDLA
HHCCCCEEHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGKDALASVGATGSINFLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEEEE
VGFAQGMTAGLTILTAQRFGAKDELAIKKSYVTGLYFTIAISILLSILSLIFVGPLLQVM
EEECCCHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDSKTPLYALIAASILNIAFEYF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEFQISKNLWRLDRAEIVHHARLGI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSKIDQFAMLPMISIGLAMATFGAQNY
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAKQYKRINQGLTRALTIAVGWSIIFAIILNLAHFYFTTAFISSSQTAVIEMSSHYYLVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEC
GSFYWLLAILFVTRSTIQGLGNAKIPTLCGFAELFMRAGVAIIGVLLLNYTVIISSNPAA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCH
WLGSTSILIPTTIRMIKRFRQNQDLA
HHCCCCEEHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]