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The map label for this gene is ybaI

Identifier: 15672089

GI number: 15672089

Start: 109450

End: 110385

Strand: Reverse

Name: ybaI

Synonym: L109453

Alternate gene names: 15672089

Gene position: 110385-109450 (Counterclockwise)

Preceding gene: 15672095

Following gene: 15672080

Centisome position: 4.67

GC content: 33.87

Gene sequence:

>936_bases
ATGGAAGAATTAGCGATTGTTGTCCCCGTTTATAACGAAGAAGAAACGCTTGAGCTCTTTATTAAAGAGGTAAATGACAA
AACAGAAAAACTCGAGCTAAAAAAGGTTTTTTACTTTGTAAACGACGGTTCTAGTGACCAAACGCTTCCTCTTATAAAAA
AATTAGCGAGTCAAGTTGATAATATTAACTACATTAGTTTCTCAAGAAATTTTGGTAAAGAAGCAGCTTTACTTGCTGGT
TTAGAAGCTACTACAGAACCTCTTGTTACAGTAATGGATGTTGATTTACAAGATCCACCTGAACTACTTGTTTCTATGTA
TCAGAAACTTCAAGAAGGTTATGATAGTGTTGGTGCTCGCAGAATTTCACGTTCTGGTGAATCTCCACTGATTTCATTTT
TCTCTCGACTTTTTTATAAGATTATTAATAAAGTATCGACTACACCTATTGTAGACGGAGCCAGAGATTTTCGGCTTATG
ACTCGTCAAGTTGTGGATAGTATTTTGACACTCAGAGAAAATAATCGTTTTTCAAAAGGGCTTTTTTCTTGGGTCGGTTA
TGATGTAACTTATTTAGAATACGAAAATCACGAACGAAGTGCTGGTCAAACTTCTTGGTCTTTTAGTCAACTTCTCCGTT
ATTCTATTGATGGGATTATAAATTTTTCGGAAATGCCGCTCAATATTGCGACATTTGTTGGCTTTTTTAGTTTTTTAGCC
TCACTTTTACTCAGTATTTTTTATCTTCTTAAAACACTGATTTACGGTGACCCTGTTCAAGGTTTCCCAACTTTGATTGT
TTTGATTTTACTTTTAGGCGGCTTACAACTTCTCTCTCTTGGAATTATTGGTAAATATATCGCTAAAATATTCCTGGAAA
CAAAAAAACGTCCCAATTATATTATTAAAGAAAGTAATTTAAAAGAGCTTGACTAA

Upstream 100 bases:

>100_bases
CATTTTAATAACCTCAAAAGAAAGCTTGACATCACAGGACTCTTTAGGTATTATCATAAATAGGTACTAAGATAAGATAA
AAAAACAATAAAGGAAAAAA

Downstream 100 bases:

>100_bases
GTCAAGCTCTTTTTTTTAAGCATTTGTCCGTTTTACAGAATAAACATCTGGGGTCATTTTGATTTTATCAACAATCAAAG
TCAAATCTGATAGATTTTTA

Product: glycosil transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNINYISFSRNFGKEAALLAG
LEATTEPLVTVMDVDLQDPPELLVSMYQKLQEGYDSVGARRISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLM
TRQVVDSILTLRENNRFSKGLFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDGIINFSEMPLNIATFVGFFSFLA
SLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNYIIKESNLKELD

Sequences:

>Translated_311_residues
MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNINYISFSRNFGKEAALLAG
LEATTEPLVTVMDVDLQDPPELLVSMYQKLQEGYDSVGARRISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLM
TRQVVDSILTLRENNRFSKGLFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDGIINFSEMPLNIATFVGFFSFLA
SLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNYIIKESNLKELD
>Mature_311_residues
MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVDNINYISFSRNFGKEAALLAG
LEATTEPLVTVMDVDLQDPPELLVSMYQKLQEGYDSVGARRISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLM
TRQVVDSILTLRENNRFSKGLFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDGIINFSEMPLNIATFVGFFSFLA
SLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNYIIKESNLKELD

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=41.5282392026578, Blast_Score=240, Evalue=8e-65,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=26.2987012987013, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35372; Mature: 35372

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVD
CCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHC
NINYISFSRNFGKEAALLAGLEATTEPLVTVMDVDLQDPPELLVSMYQKLQEGYDSVGAR
CCEEEEECCCCCCHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKG
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
LFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDGIINFSEMPLNIATFVGFFSFLA
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
SLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IIKESNLKELD
EEECCCCCCCC
>Mature Secondary Structure
MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGSSDQTLPLIKKLASQVD
CCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHC
NINYISFSRNFGKEAALLAGLEATTEPLVTVMDVDLQDPPELLVSMYQKLQEGYDSVGAR
CCEEEEECCCCCCHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLMTRQVVDSILTLRENNRFSKG
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
LFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDGIINFSEMPLNIATFVGFFSFLA
HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
SLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IIKESNLKELD
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]