Click here to switch to the map view.

The map label for this gene is yajF

Identifier: 15672071

GI number: 15672071

Start: 92200

End: 92805

Strand: Reverse

Name: yajF

Synonym: L92204

Alternate gene names: 15672071

Gene position: 92805-92200 (Counterclockwise)

Preceding gene: 15672072

Following gene: 15672070

Centisome position: 3.92

GC content: 28.05

Gene sequence:

>606_bases
ATGATAAATATTTGGAATAAATCTAAAACAGTTATATTAGCACTATTTTTACTATTTCTTTCACAAGTACCTTTATATTA
CGTAGAATATGAAAATGAAAGGCAAAATCTATTTGGAGTTGCAAATAAAATTACAGTGAATTTCATTTTAATTGGTCTGT
TGATTATTTTAATTGCTATAATGTTAGGCATAAAAAATGGATTTTACAAAAACGCTAAGAGAACGTTAGAGTGGAAGAAT
ATTATATTAATCTTAATACTGATAATACCTTCAGTTGCATTAGACATATTATTTAGCCAGTTTATACAGTTCCATCATTT
GGGAAGAATGGATAACCAAATAGCAATAGATAGTGTAATGGGTTCATTGTTGTGGTTTGGCAAAATCTTAGGAGTTGCAT
TACTTGCCCCAATACTTGAAGAAAGTATTTTTAGAGCATCGATTTATAAAATATTTAGCAATAATAAAATTGCATTTGTT
TTTTCCAGTTTATTATTTACATTTATGCATAGTGGCTATAGCTGGGTTTTTCTTATTTATCTACCTATGAGTTTGGCGGT
AACGTTTATCTATCATCGTAGAAGTGATGTTATCCTTAAATCTTAG

Upstream 100 bases:

>100_bases
AAGTTTTTGTAACACAATTTACAAGAATCAATAAGGCAAATTTTACTAAGGGAGGACTTTTCTCCCTTAGTTTGCGTTTA
AATAAAAATTAAGAGGAAAA

Downstream 100 bases:

>100_bases
AGTCACTATTGTATAATTTAGACAAAGGACAAAAACATGCAAAAACGCTACTCAAAAGAATTTAAAGAAACCCTTATCGC
TTTCTATCATTCTGGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKITVNFILIGLLIILIAIMLGIKNGFYKNAKRTLEWKN
IILILILIIPSVALDILFSQFIQFHHLGRMDNQIAIDSVMGSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFV
FSSLLFTFMHSGYSWVFLIYLPMSLAVTFIYHRRSDVILKS

Sequences:

>Translated_201_residues
MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKITVNFILIGLLIILIAIMLGIKNGFYKNAKRTLEWKN
IILILILIIPSVALDILFSQFIQFHHLGRMDNQIAIDSVMGSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFV
FSSLLFTFMHSGYSWVFLIYLPMSLAVTFIYHRRSDVILKS
>Mature_201_residues
MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKITVNFILIGLLIILIAIMLGIKNGFYKNAKRTLEWKN
IILILILIIPSVALDILFSQFIQFHHLGRMDNQIAIDSVMGSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFV
FSSLLFTFMHSGYSWVFLIYLPMSLAVTFIYHRRSDVILKS

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0177 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAJF_LACLA (Q9CJB0)

Other databases:

- EMBL:   AE005176
- PIR:   A86636
- RefSeq:   NP_266245.1
- GeneID:   1113694
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L92204
- NMPDR:   fig|272623.1.peg.96
- HOGENOM:   HBG517911
- ProtClustDB:   CLSK510808
- BioCyc:   LLAC272623:L92204-MONOMER
- InterPro:   IPR003675

Pfam domain/function: PF02517 Abi

EC number: NA

Molecular weight: Translated: 23173; Mature: 23173

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbff9f48)-; HASH(0xc20ef78)-; HASH(0xc20676c)-; HASH(0xc208960)-; HASH(0xc20ad24)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKITVNFILIGLLIILIAI
CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGIKNGFYKNAKRTLEWKNIILILILIIPSVALDILFSQFIQFHHLGRMDNQIAIDSVM
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFVFSSLLFTFMHSGYSWVFLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LPMSLAVTFIYHRRSDVILKS
HHHHHHHHHHHHCCCCCEECH
>Mature Secondary Structure
MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKITVNFILIGLLIILIAI
CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGIKNGFYKNAKRTLEWKNIILILILIIPSVALDILFSQFIQFHHLGRMDNQIAIDSVM
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFVFSSLLFTFMHSGYSWVFLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LPMSLAVTFIYHRRSDVILKS
HHHHHHHHHHHHCCCCCEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471