| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yahI
Identifier: 15672056
GI number: 15672056
Start: 77479
End: 78312
Strand: Reverse
Name: yahI
Synonym: L77482
Alternate gene names: 15672056
Gene position: 78312-77479 (Counterclockwise)
Preceding gene: 15672065
Following gene: 15672055
Centisome position: 3.31
GC content: 38.97
Gene sequence:
>834_bases ATGACACAAAAAATTGTTGCAATCACAGGTGCTTCAAATGGAATGGGATTTGAGGCAGCAGAACTTTTTGCCAAACGGGG TTGGAAAGTATACGCTGGGGCACGCCGCGTTGAAAAAATTCCACAATATGAAAACAACATCAAAGCACTAAAACTGGATG TTACTAGCTCTGAATCAAACCAAGCTTTTGTGAAAAAAATTTTAGATGAGGCAGGTCATATTGACGTCCTCATCAATAAT GCAGGTTATGGCGAATACGGACCAGCCGAAGAAATCCCAATGGATAAAATTCGCAATCAGTTTGAAACCAACTTCTTTGG TGCGGTTGAATTAACTCAACTTGTCTTACCAACAATGAGAGCTCAAAATTATGGACGAATTGTTAATATTTCATCAATTG GTGGAGATGTCTATATGCCACTTGGTGCTTATTATCATGCTACAAAAGCCGCCCTTCAACAATGGTCTGACGTTTTGGAC CTCGAAGTTGCCCAATTTGGTATCCGTTCAGTTTGTGTTCAACCTGGTGGAACTCAGTCAAGCTGGGGAAATATTGCCCT AGAAAATTCTAAAAAGAATATGAGTTCAAACTCTGCTTACCAACCTTTGGTAAATTCTGTTGCTTCAGGACTTGACCGTT TTATGAAAAATAGTGCTAAAGCTTCTGATTTAGCTGAAGTTTTTTATAAAGCTGCGACGGAGATTAAACCGAGCCTTCGC TACCTCCACTCTTTCGGTGATAAATTCATGGTAAATGTTGCTCGTAAACATCCAAAAATCTTTCGTAAAGCTCTTCTTAT TACAATGCGTTACTTTGAAAAGCACAATCAATAA
Upstream 100 bases:
>100_bases CTCCGCGGAAGTTTTTTTAGCCTTTGATTTACTAAAGTGGTATAATTACTTTTAAAATCATGAAAACAAGATACAGACAA ATTGAAAGGACTCTAAAGAG
Downstream 100 bases:
>100_bases AAATACAACCTTGAGTTGTATTTTTTTATTTCTACTTTTAAAAGTTCTATCAGCTCCATTAAAAAATCATATCGATAGAA TTTTCTGAATTTCTTATAAT
Product: short-chain type dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYENNIKALKLDVTSSESNQAFVKKILDEAGHIDVLINN AGYGEYGPAEEIPMDKIRNQFETNFFGAVELTQLVLPTMRAQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLD LEVAQFGIRSVCVQPGGTQSSWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNSAKASDLAEVFYKAATEIKPSLR YLHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHNQ
Sequences:
>Translated_277_residues MTQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYENNIKALKLDVTSSESNQAFVKKILDEAGHIDVLINN AGYGEYGPAEEIPMDKIRNQFETNFFGAVELTQLVLPTMRAQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLD LEVAQFGIRSVCVQPGGTQSSWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNSAKASDLAEVFYKAATEIKPSLR YLHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHNQ >Mature_276_residues TQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYENNIKALKLDVTSSESNQAFVKKILDEAGHIDVLINNA GYGEYGPAEEIPMDKIRNQFETNFFGAVELTQLVLPTMRAQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLDL EVAQFGIRSVCVQPGGTQSSWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNSAKASDLAEVFYKAATEIKPSLRY LHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=35.2331606217617, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI223718074, Length=265, Percent_Identity=26.4150943396226, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI7657478, Length=184, Percent_Identity=36.4130434782609, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI20149619, Length=185, Percent_Identity=32.972972972973, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4504503, Length=186, Percent_Identity=33.8709677419355, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI157739938, Length=189, Percent_Identity=29.1005291005291, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI22507405, Length=236, Percent_Identity=29.2372881355932, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI40548397, Length=185, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI214010158, Length=185, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI214010156, Length=185, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI22758144, Length=185, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI19743808, Length=268, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI119392083, Length=185, Percent_Identity=32.4324324324324, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI44680136, Length=186, Percent_Identity=29.5698924731183, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI44680133, Length=186, Percent_Identity=29.5698924731183, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI17738292, Length=186, Percent_Identity=29.5698924731183, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI150247226, Length=184, Percent_Identity=30.4347826086957, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI59889578, Length=158, Percent_Identity=29.1139240506329, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI166795268, Length=202, Percent_Identity=32.6732673267327, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI40254992, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI109715829, Length=194, Percent_Identity=26.2886597938144, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI19923817, Length=285, Percent_Identity=23.5087719298246, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI50726952, Length=283, Percent_Identity=28.6219081272085, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI142976729, Length=223, Percent_Identity=26.0089686098655, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI32483357, Length=203, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI7705855, Length=182, Percent_Identity=33.5164835164835, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4503817, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1786701, Length=182, Percent_Identity=35.7142857142857, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787820, Length=177, Percent_Identity=32.2033898305085, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787335, Length=177, Percent_Identity=35.5932203389831, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87082100, Length=187, Percent_Identity=33.1550802139037, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787905, Length=140, Percent_Identity=33.5714285714286, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788459, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786812, Length=179, Percent_Identity=29.0502793296089, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI2367365, Length=180, Percent_Identity=31.6666666666667, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790717, Length=187, Percent_Identity=28.8770053475936, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17538486, Length=190, Percent_Identity=35.7894736842105, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=202, Percent_Identity=33.1683168316832, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562904, Length=200, Percent_Identity=33, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI193204405, Length=196, Percent_Identity=29.5918367346939, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562908, Length=198, Percent_Identity=30.8080808080808, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560220, Length=198, Percent_Identity=30.3030303030303, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71997402, Length=200, Percent_Identity=35, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17565030, Length=190, Percent_Identity=32.6315789473684, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17559104, Length=222, Percent_Identity=29.2792792792793, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17570069, Length=200, Percent_Identity=34.5, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71994604, Length=188, Percent_Identity=29.2553191489362, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17562910, Length=191, Percent_Identity=34.5549738219895, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17551412, Length=227, Percent_Identity=30.3964757709251, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538480, Length=208, Percent_Identity=30.2884615384615, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560150, Length=192, Percent_Identity=32.2916666666667, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562906, Length=198, Percent_Identity=28.2828282828283, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562990, Length=186, Percent_Identity=30.6451612903226, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71994600, Length=183, Percent_Identity=29.5081967213115, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI72000259, Length=220, Percent_Identity=29.0909090909091, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17563726, Length=188, Percent_Identity=30.8510638297872, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115534660, Length=185, Percent_Identity=29.1891891891892, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17531453, Length=233, Percent_Identity=27.8969957081545, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567345, Length=288, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17557780, Length=194, Percent_Identity=28.8659793814433, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544670, Length=223, Percent_Identity=29.5964125560538, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193210355, Length=183, Percent_Identity=30.0546448087432, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=28.2722513089005, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=33.6734693877551, Blast_Score=99, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6322067, Length=190, Percent_Identity=32.6315789473684, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319635, Length=187, Percent_Identity=32.0855614973262, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=190, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358495, Length=227, Percent_Identity=31.2775330396476, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI28571526, Length=181, Percent_Identity=34.8066298342541, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI21357041, Length=181, Percent_Identity=33.1491712707182, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397609, Length=179, Percent_Identity=30.7262569832402, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644339, Length=183, Percent_Identity=31.6939890710383, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24580925, Length=236, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24651139, Length=193, Percent_Identity=29.0155440414508, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24640442, Length=185, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI116007238, Length=178, Percent_Identity=28.6516853932584, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI116007236, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24643142, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355319, Length=205, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28571387, Length=190, Percent_Identity=30, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=27.1676300578035, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24639444, Length=184, Percent_Identity=29.8913043478261, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 30820; Mature: 30688
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYENNIKALKLDVTSSESN CCCEEEEEECCCCCCCHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCH QAFVKKILDEAGHIDVLINNAGYGEYGPAEEIPMDKIRNQFETNFFGAVELTQLVLPTMR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH AQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLDLEVAQFGIRSVCVQPGGTQS CCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNSAKASDLAEVFYKAATEIKPSLR CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YLHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHNQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYENNIKALKLDVTSSESN CCEEEEEECCCCCCCHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCH QAFVKKILDEAGHIDVLINNAGYGEYGPAEEIPMDKIRNQFETNFFGAVELTQLVLPTMR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH AQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLDLEVAQFGIRSVCVQPGGTQS CCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNSAKASDLAEVFYKAATEIKPSLR CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YLHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHNQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9139899; 9252185 [H]