| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yahG
Identifier: 15672054
GI number: 15672054
Start: 73207
End: 74844
Strand: Reverse
Name: yahG
Synonym: L73210
Alternate gene names: 15672054
Gene position: 74844-73207 (Counterclockwise)
Preceding gene: 15672055
Following gene: 15672053
Centisome position: 3.16
GC content: 38.16
Gene sequence:
>1638_bases ATGCTTACAGTATCTGATATTTCATTACAATTCTCTGACCGCAAGCTTTTTGACGAAGTAAACATCAAGTTTACACCGGG AAACTGTTACGGTTTAATCGGTGCCAATGGGGCTGGTAAATCAACTTTCTTGAAAATCTTGGACGGTGAAATTCAACCAA CAACAGGTCACATCTCAATGGGGCCAAACGAACGCATGTCTGTTCTTCGTCAAAATCATTACGATTACGAAGACCAAACA CCACTTGATGTCGTGATGATGGGGAATGAAAAACTTTTCGCCATTAATCAAGAAAAAAATGCCATTTACATGAATCCTGA TGCGACAGATGATGACTTCATGAAAGCTGCCGAACTTGAGGCAGAATTTGGCGAAATGGGTGGTTATGAAGCCGAAGCTG ACGCTGCTCGTCTTTTGCAAAACCTCGGAATTAAAGCTGAACAACATACAGATTTGATGGCCAATTTGACTTCTGGCGAA CACGTTAAAGTCCTTCTTGCTAAAGCACTTTTTGGTAAACCTGATGTTCTTCTTCTTGACGAACCGACCAATGGACTTGA TATTCAAGCAATAGCTTGGCTTGAAGAATTTTTGATTAATTTTGAAAATACCGTTATCGTTGTTTCCCATGACCGCCACT TCTTGAACAATGTTTGTACTTACATGGCAGACCTTGACTATGGTAAAATCAAACTTTACCCAGGGAACTATGATTTCTGG AAAGAGTCTTCTGAACTTGCTCTTCGCTTGCAAGGTGACCAAAACCGTAAAGCTGAAGAGAAAATTGCCGAGTTGAAAGA GTTTATCGCTCGTTTCTCTGCTAATGCGTCTAAATCAAAACAAGCAACATCACGTAAGAAAATGCTTGATAAAATTGAAG TTGAAGAATTCGTTCCTTCATCACGCAAATATCCATTCGTTGGTTTTGAACAAGAACGCGAAATCGGTAATGATTTACTT CGTGTAGAAAATCTTTCAGTTGCGATTGAAGGAGAAATGATTATCGAAAATACTTCATTCATCTTAAATCCTGGTGATAA GACCGTATTCATTGGTCAAAACGATATTCAACAAACAACGTTACTTCGTGCTTTAATGGATGATGTAGAAGATAATTGGA CCGTAACTGGTGATATTAAATGGGGAGTTACATCTTCTCGTTCATATCTTCCAAAAGATAATACCAAAGATTTTGATACA AGTGACTCTATTCTTGACTGGTTGCGTCAATTTGTATTGACAAAAGAGGAAGACGATAATACTTACCTTCGCGGTTTCCT TGGACGTATGCTTTTCAAAGGTGAAGAATCTTTAAAAGCTGTCAATGTCCTCTCAGGGGGAGAAAAAGTTCGTGTCATGC TTTCTAAAATGATGCTTCAACGAGCTAATGTGCTTGTTCTTGATGACCCAACTAATCACTTGGATTTGGAATCTATTTCT GCACTTAATGATGGTTTGAAATCATTTAAAGGCTCAATCCTCTTTGCTTCACATGACCATGAATTCATTAATACTATTGC CAATCACATTGTTGTTCTTGGTAAATCTGGTGTCATTGACCGTATTGGTGAAACTTATGATGATTTCTTAGATAATGCAG AAGTACAAGAAAAAGTAAAAGCACTCTGGGCCGATTAA
Upstream 100 bases:
>100_bases AAAATAAGGGCAGAATGCTTATTTTTTAGCACAAAAGTAGTCAAACTACTTTATCGAAAAATATTTGAGAATTTTTCTCA TCAATAAAAAAGGAAAATAT
Downstream 100 bases:
>100_bases ATTTATTATTATTTAGTTCGTTTACACTGTTGTGTAAACCAAGTTTACAGTTCTGTCAGTAAAATTTACTGACAGAATTC ATTTTCATCCACTGTTAGCG
Product: ABC transporter ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL RVENLSVAIEGEMIIENTSFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNTKDFDT SDSILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKALWAD
Sequences:
>Translated_545_residues MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL RVENLSVAIEGEMIIENTSFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNTKDFDT SDSILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKALWAD >Mature_545_residues MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL RVENLSVAIEGEMIIENTSFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNTKDFDT SDSILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKALWAD
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=553, Percent_Identity=29.4755877034358, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=30.164533820841, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=30.164533820841, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI10947135, Length=556, Percent_Identity=26.6187050359712, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI69354671, Length=556, Percent_Identity=26.6187050359712, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=44.3202979515829, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1789751, Length=541, Percent_Identity=29.0203327171904, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI2367384, Length=520, Percent_Identity=31.3461538461538, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI1787182, Length=537, Percent_Identity=29.0502793296089, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1788225, Length=243, Percent_Identity=23.8683127572016, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=24.1666666666667, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=30.5418719211823, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17553372, Length=544, Percent_Identity=29.5955882352941, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17555318, Length=539, Percent_Identity=28.0148423005566, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=24.1252302025783, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17565938, Length=211, Percent_Identity=26.0663507109005, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=32.3251417769376, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321121, Length=562, Percent_Identity=28.2918149466192, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6325030, Length=233, Percent_Identity=29.6137339055794, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324314, Length=240, Percent_Identity=28.3333333333333, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323278, Length=237, Percent_Identity=27.4261603375527, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=28.996282527881, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24642252, Length=552, Percent_Identity=29.3478260869565, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI18859989, Length=552, Percent_Identity=29.3478260869565, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=26.7034990791897, Blast_Score=186, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 61382; Mature: 61382
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISM CEEEEEEEEEECCCHHHEECEEEECCCCEEEEEECCCCCHHHHHEEECCCCCCCCCEEEC GPNERMSVLRQNHYDYEDQTPLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELE CCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHHHHH AEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGEHVKVLLAKALFGKPDVLLLD HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHEECCCCCHHHHHHHHHHCCCCCEEEEE EPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPS CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC SRKYPFVGFEQEREIGNDLLRVENLSVAIEGEMIIENTSFILNPGDKTVFIGQNDIQQTT CCCCCCCCCHHHHHHHHHHEEEECEEEEEECEEEEECCEEEECCCCCEEEECCCCHHHHH LLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNTKDFDTSDSILDWLRQFVLTKEEDDN HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC TYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS HHHHHHHHHHHHCCCHHHHEEHECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVK HHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH ALWAD HHCCC >Mature Secondary Structure MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISM CEEEEEEEEEECCCHHHEECEEEECCCCEEEEEECCCCCHHHHHEEECCCCCCCCCEEEC GPNERMSVLRQNHYDYEDQTPLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELE CCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHHHHH AEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGEHVKVLLAKALFGKPDVLLLD HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHEECCCCCHHHHHHHHHHCCCCCEEEEE EPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPS CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC SRKYPFVGFEQEREIGNDLLRVENLSVAIEGEMIIENTSFILNPGDKTVFIGQNDIQQTT CCCCCCCCCHHHHHHHHHHEEEECEEEEEECEEEEECCEEEECCCCCEEEECCCCHHHHH LLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNTKDFDTSDSILDWLRQFVLTKEEDDN HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC TYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS HHHHHHHHHHHHCCCHHHHEEHECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVK HHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH ALWAD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]