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The map label for this gene is yafB

Identifier: 15672032

GI number: 15672032

Start: 51029

End: 52411

Strand: Reverse

Name: yafB

Synonym: L1004

Alternate gene names: 15672032

Gene position: 52411-51029 (Counterclockwise)

Preceding gene: 15672035

Following gene: 30023970

Centisome position: 2.22

GC content: 35.21

Gene sequence:

>1383_bases
ATGGCGGCTATTTTAATTTCACTCATTGGTAAATACGGAATGAATGGAATATTTATTGCTACTTTTATGGCAGGAATCTT
TCTATTACTCGCTGGTATTTTCCGTTTAGGAAATTTAATTTCACTTATTCCCTCTCCAGTAATAACAGGTTTTACTTCTG
GTATTGCCATCATCATTGCCAGCGGACAAATTAAAAACTTTTTCGGAATAGAACATTTTACAGGTTCTTTTTTTGATTTA
ATGAAATTTATCTCTGGCTTACACATTGATTATCCTTCAACAATTATTGGACTTTTAACAATCTTATTAATGATTTTCTA
TCCTAAATCATGGGGTAAAAAATTCCCAGCTTCATTGTTGGCTATCCTTCTGTCAACTTTAGCAGTCCTTGCTCTAAAAC
TAGATATTCCTTTAGTAGGAAAAATTCCAACCACCCTTATTCCCCAAGCTCATCTACGTTTGACTGAATTGAATCCTCAA
GACATGAAAACTCTACTTATCCCAGCCATAAGCATTACCGTACTTGGAATGACCGAAAGTCTCCTTTGTGGTGCCTCAGC
AGGCCGTGCAACCAATCACCCAATGGACAATAACCAAGAACTCGTTGCTCAAGGAATCGGAAATATTTTCATTCCCTTTT
TCGGAGGAATTCCAGCAACAGCCGCAATTGCTCGAACAAGTGTAGCTATAAAAGCAGGTGCTCAAACTCGCTTAACTGGT
ATTATTCACGCCCTTATTCTTCTCCTCTCAATGTTTCTATTTGCACCATTTATGACTCATATTCCACTAAGTGCCCTTGC
TGGTGTTCTTATCATGACCGCCGTAAGAATGAACGAGTGGGAAGCCATTCGTTTCTTATTCAAAAATAAATTAAAAAGTG
GAATCATCGAATTTTTTGTAACGATGATTATCACTGTTATTTTCGATTTAAGTACTGCAATATTAGCAGGAATCGTTGTT
GGTTTCTTACTCTTTATCGTAAAAATTTCCCAAATTGAGATTAATAGTTCACAAATTGAACCCGAACGAATCAGTCAAAA
TCATCATGAAGTATTTACTGATTGGACAGTTATTTATATCTCTGGCCCGCTTTTCTTTTTAAATAGTAGCAAGTTAAAAC
AAGCAATTGATGAACTTCCAGCAAATACTAATGCTGTTCTTTCTCTAAGAGGTGTACCGATGATTGACGTTACTTCTATA
AAACTATTGATTGATATTTACAGTATTTTTCATAAGGAAGAACGCCAAATCGTCTTCGCCTCAATGAATCCTAAATTAAA
AGAATCATTTAAGAGAACTGGACTTATTAGCATGGTTGGTGAAGAAGCCATTTACCCAAGTGTCAATGAATTCCTTTTAG
ATTTAGTTGATAAAAATAAATAA

Upstream 100 bases:

>100_bases
CTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAGTCTA
TATTTTGGGGGTCACTACAA

Downstream 100 bases:

>100_bases
AAAATAGGCCAATAATTGGTCTATTTTTTATTTATAAACTCCTAAAAGAAATTTGAGAAAGAACTCAAATAGATGAGCTT
TTATCTAGAATATCCACCAT

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDL
MKFISGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQ
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKAGAQTRLTG
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVRMNEWEAIRFLFKNKLKSGIIEFFVTMIITVIFDLSTAILAGIVV
GFLLFIVKISQIEINSSQIEPERISQNHHEVFTDWTVIYISGPLFFLNSSKLKQAIDELPANTNAVLSLRGVPMIDVTSI
KLLIDIYSIFHKEERQIVFASMNPKLKESFKRTGLISMVGEEAIYPSVNEFLLDLVDKNK

Sequences:

>Translated_460_residues
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDL
MKFISGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQ
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKAGAQTRLTG
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVRMNEWEAIRFLFKNKLKSGIIEFFVTMIITVIFDLSTAILAGIVV
GFLLFIVKISQIEINSSQIEPERISQNHHEVFTDWTVIYISGPLFFLNSSKLKQAIDELPANTNAVLSLRGVPMIDVTSI
KLLIDIYSIFHKEERQIVFASMNPKLKESFKRTGLISMVGEEAIYPSVNEFLLDLVDKNK
>Mature_459_residues
AAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDLM
KFISGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQD
MKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKAGAQTRLTGI
IHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVRMNEWEAIRFLFKNKLKSGIIEFFVTMIITVIFDLSTAILAGIVVG
FLLFIVKISQIEINSSQIEPERISQNHHEVFTDWTVIYISGPLFFLNSSKLKQAIDELPANTNAVLSLRGVPMIDVTSIK
LLIDIYSIFHKEERQIVFASMNPKLKESFKRTGLISMVGEEAIYPSVNEFLLDLVDKNK

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI16306483, Length=419, Percent_Identity=21.2410501193317, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI20336282, Length=419, Percent_Identity=21.2410501193317, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4505697, Length=385, Percent_Identity=24.6753246753247, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI94721259, Length=405, Percent_Identity=20, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI94721255, Length=405, Percent_Identity=20, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI94721253, Length=405, Percent_Identity=20, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI94721257, Length=405, Percent_Identity=20, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI262206105, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI262206075, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI262206069, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI262206063, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI45827800, Length=384, Percent_Identity=19.7916666666667, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI39752683, Length=382, Percent_Identity=19.8952879581152, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI45827802, Length=328, Percent_Identity=20.4268292682927, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI16418457, Length=268, Percent_Identity=23.134328358209, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI301601599, Length=268, Percent_Identity=23.134328358209, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI4557535, Length=381, Percent_Identity=20.7349081364829, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081859, Length=488, Percent_Identity=31.9672131147541, Blast_Score=171, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI86564876, Length=511, Percent_Identity=22.3091976516634, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86564196, Length=509, Percent_Identity=21.4145383104126, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17551690, Length=476, Percent_Identity=21.218487394958, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI86565215, Length=429, Percent_Identity=23.0769230769231, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17566848, Length=471, Percent_Identity=22.7176220806794, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=523, Percent_Identity=22.3709369024857, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203292, Length=277, Percent_Identity=23.1046931407942, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=490, Percent_Identity=23.0612244897959, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6323121, Length=370, Percent_Identity=24.5945945945946, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24651449, Length=460, Percent_Identity=22.1739130434783, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24649801, Length=466, Percent_Identity=22.9613733905579, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI85815873, Length=335, Percent_Identity=26.5671641791045, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24666186, Length=299, Percent_Identity=26.4214046822742, Blast_Score=89, Evalue=9e-18,
Organism=Drosophila melanogaster, GI19922482, Length=438, Percent_Identity=23.5159817351598, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21358633, Length=360, Percent_Identity=21.3888888888889, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 50323; Mature: 50192

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE
SGQIKNFFGIEHFTGSFFDLMKFISGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLL
CCCCCHHHCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHH
AILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQDMKTLLIPAISITVLGMTES
HHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCHHHHHHHHHHHHHHEEECCHHH
LLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKAGAQTRLTG
HHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCCHHHHHHHHHHHEECCCHHHHHH
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVRMNEWEAIRFLFKNKLKSGIIEFFV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TMIITVIFDLSTAILAGIVVGFLLFIVKISQIEINSSQIEPERISQNHHEVFTDWTVIYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCHHHHCCEEEEEE
SGPLFFLNSSKLKQAIDELPANTNAVLSLRGVPMIDVTSIKLLIDIYSIFHKEERQIVFA
ECCEEEECCHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCEEEEE
SMNPKLKESFKRTGLISMVGEEAIYPSVNEFLLDLVDKNK
ECCCHHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE
SGQIKNFFGIEHFTGSFFDLMKFISGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLL
CCCCCHHHCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHH
AILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQDMKTLLIPAISITVLGMTES
HHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCHHHHHHHHHHHHHHEEECCHHH
LLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKAGAQTRLTG
HHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCCHHHHHHHHHHHEECCCHHHHHH
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVRMNEWEAIRFLFKNKLKSGIIEFFV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TMIITVIFDLSTAILAGIVVGFLLFIVKISQIEINSSQIEPERISQNHHEVFTDWTVIYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCHHHHCCEEEEEE
SGPLFFLNSSKLKQAIDELPANTNAVLSLRGVPMIDVTSIKLLIDIYSIFHKEERQIVFA
ECCEEEECCHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCEEEEE
SMNPKLKESFKRTGLISMVGEEAIYPSVNEFLLDLVDKNK
ECCCHHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]