Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668869

Identifier: 15668869

GI number: 15668869

Start: 616669

End: 617112

Strand: Direct

Name: 15668869

Synonym: MJ0688

Alternate gene names: NA

Gene position: 616669-617112 (Clockwise)

Preceding gene: 15668866

Following gene: 15668875

Centisome position: 37.04

GC content: 22.97

Gene sequence:

>444_bases
ATGTTTCTAAAATTTCAAAGATGTGAAAAAATGAATGTTAAGATAATAGTTGAGTTTATAAAAAAGTTCGCAGAAGAAAA
TAACTGTAAAAAAATAGCTGAGATTGGAATTGGATTTAAATTTGATGTTGCAAGAGAATTAAGTAAATATTTCGATTTGA
TAGCCATAGATATTAATGAAAAAGCTATTGAAAAAGCTAAATTGTTGGGATTAAATGCTTATAAAGATGATTTATTTAAT
CCAAATATAAGTTTATATAAAAATATTGATTTAATATATTCCATAAGACCTCCAAGAGATTTACAGCCGTATATTTTAGA
TTTATCAAAAAAAGTTAATGCAAATTTAATTATAAGACCTCTTTTGAATGAGATGCCAATAAAAGAGCTAAAACTAAAAA
ACTACAAAGGAGAAGTGTTTTATATAAAAGAAAAACAAATTTAA

Upstream 100 bases:

>100_bases
GGAAGGTGTTCAAACCTTCCTTACGAACTTCAGTAACTTTTGCAAGAAACTATAAAAGTCCAAATTGGACAGAATTTTTT
ATTTTCACATTTATATTTAA

Downstream 100 bases:

>100_bases
GCTTTTAATTTCTTCCTTCGAAACTTTTAGTAAAAGTTTCATCAAAACTCGTCCATTAAGTTAGGGCTTTCAGCCCTAAT
TAATGTCCATTCACTTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN
PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI

Sequences:

>Translated_147_residues
MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN
PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI
>Mature_147_residues
MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN
PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI

Specific function: Unknown

COG id: COG1255

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0146 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005353
- ProDom:   PD021130 [H]

Pfam domain/function: PF03686 UPF0146 [H]

EC number: NA

Molecular weight: Translated: 17320; Mature: 17320

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCEEEEECCH
KAIEKAKLLGLNAYKDDLFNPNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRP
HHHHHHHHHCCCCHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHECCCCCCCCEEEEE
LLNEMPIKELKLKNYKGEVFYIKEKQI
HHHHCCHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCEEEEECCH
KAIEKAKLLGLNAYKDDLFNPNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRP
HHHHHHHHHCCCCHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHECCCCCCCCEEEEE
LLNEMPIKELKLKNYKGEVFYIKEKQI
HHHHCCHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]