Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668869
Identifier: 15668869
GI number: 15668869
Start: 616669
End: 617112
Strand: Direct
Name: 15668869
Synonym: MJ0688
Alternate gene names: NA
Gene position: 616669-617112 (Clockwise)
Preceding gene: 15668866
Following gene: 15668875
Centisome position: 37.04
GC content: 22.97
Gene sequence:
>444_bases ATGTTTCTAAAATTTCAAAGATGTGAAAAAATGAATGTTAAGATAATAGTTGAGTTTATAAAAAAGTTCGCAGAAGAAAA TAACTGTAAAAAAATAGCTGAGATTGGAATTGGATTTAAATTTGATGTTGCAAGAGAATTAAGTAAATATTTCGATTTGA TAGCCATAGATATTAATGAAAAAGCTATTGAAAAAGCTAAATTGTTGGGATTAAATGCTTATAAAGATGATTTATTTAAT CCAAATATAAGTTTATATAAAAATATTGATTTAATATATTCCATAAGACCTCCAAGAGATTTACAGCCGTATATTTTAGA TTTATCAAAAAAAGTTAATGCAAATTTAATTATAAGACCTCTTTTGAATGAGATGCCAATAAAAGAGCTAAAACTAAAAA ACTACAAAGGAGAAGTGTTTTATATAAAAGAAAAACAAATTTAA
Upstream 100 bases:
>100_bases GGAAGGTGTTCAAACCTTCCTTACGAACTTCAGTAACTTTTGCAAGAAACTATAAAAGTCCAAATTGGACAGAATTTTTT ATTTTCACATTTATATTTAA
Downstream 100 bases:
>100_bases GCTTTTAATTTCTTCCTTCGAAACTTTTAGTAAAAGTTTCATCAAAACTCGTCCATTAAGTTAGGGCTTTCAGCCCTAAT TAATGTCCATTCACTTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI
Sequences:
>Translated_147_residues MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI >Mature_147_residues MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINEKAIEKAKLLGLNAYKDDLFN PNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRPLLNEMPIKELKLKNYKGEVFYIKEKQI
Specific function: Unknown
COG id: COG1255
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0146 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005353 - ProDom: PD021130 [H]
Pfam domain/function: PF03686 UPF0146 [H]
EC number: NA
Molecular weight: Translated: 17320; Mature: 17320
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCEEEEECCH KAIEKAKLLGLNAYKDDLFNPNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRP HHHHHHHHHCCCCHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHECCCCCCCCEEEEE LLNEMPIKELKLKNYKGEVFYIKEKQI HHHHCCHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MFLKFQRCEKMNVKIIVEFIKKFAEENNCKKIAEIGIGFKFDVARELSKYFDLIAIDINE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCEEEEECCH KAIEKAKLLGLNAYKDDLFNPNISLYKNIDLIYSIRPPRDLQPYILDLSKKVNANLIIRP HHHHHHHHHCCCCHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHECCCCCCCCEEEEE LLNEMPIKELKLKNYKGEVFYIKEKQI HHHHCCHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]