Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is rpl14e

Identifier: 15668838

GI number: 15668838

Start: 584144

End: 584386

Strand: Direct

Name: rpl14e

Synonym: MJ0657

Alternate gene names: 15668838

Gene position: 584144-584386 (Clockwise)

Preceding gene: 15668837

Following gene: 15668839

Centisome position: 35.08

GC content: 33.74

Gene sequence:

>243_bases
ATGCCAGCTATTGAAGTAGGAAGAGTTTGTATAAAAACAGCAGGAAGAGAAGCAGGAAAAGTTTGTGTTATCGTAGATAT
CTTAGATAAAAACTTCGTTATAGTTGATGGGTTAGTTAAGAGAAGAAGATGCAACATAAAACACTTAGAACCAACAGAAA
AGAAAGTTGATATCCCAAAAGGAGCTTCAACAGAAGAAGTTAAATTAGCTTTAGATGCTGCAGGATTATTGAAGGAAGAA
TAA

Upstream 100 bases:

>100_bases
ACTTAAAAAAATAAAAACGAGGGGGCGATATTAAACCTCCCTCATTGGAGGATGAGTTGTGATTCGCGAGAGTCACAACA
ACAAAAATGAGGTGAGGTAA

Downstream 100 bases:

>100_bases
ATCAATTCTTATTTTCTTCTTTTTTATTTTTATTTTGAAACTATATTTGTAAATTTAAATTTACAAATATAGAAACTTTA
AATAACAATTTAAAACAAAA

Product: 50S ribosomal protein L14e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE

Sequences:

>Translated_80_residues
MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE
>Mature_79_residues
PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE

Specific function: Unknown

COG id: COG2163

COG function: function code J; Ribosomal protein L14E/L6E/L27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L14e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL14E_METJA (P54054)

Other databases:

- EMBL:   L77117
- PIR:   A64382
- RefSeq:   NP_247641.1
- ProteinModelPortal:   P54054
- SMR:   P54054
- GeneID:   1451523
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0657
- NMPDR:   fig|243232.1.peg.678
- TIGR:   MJ0657
- HOGENOM:   HBG551856
- OMA:   HIEPTDK
- ProtClustDB:   PRK04333
- BioCyc:   MJAN243232:MJ_0657-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00721
- InterPro:   IPR005824
- InterPro:   IPR002784
- InterPro:   IPR014722
- Gene3D:   G3DSA:2.30.30.30

Pfam domain/function: PF00467 KOW; PF01929 Ribosomal_L14e

EC number: NA

Molecular weight: Translated: 8739; Mature: 8608

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPK
CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEECCCC
GASTEEVKLALDAAGLLKEE
CCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPK
CCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEECCCC
GASTEEVKLALDAAGLLKEE
CCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087