Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is rpl14e
Identifier: 15668838
GI number: 15668838
Start: 584144
End: 584386
Strand: Direct
Name: rpl14e
Synonym: MJ0657
Alternate gene names: 15668838
Gene position: 584144-584386 (Clockwise)
Preceding gene: 15668837
Following gene: 15668839
Centisome position: 35.08
GC content: 33.74
Gene sequence:
>243_bases ATGCCAGCTATTGAAGTAGGAAGAGTTTGTATAAAAACAGCAGGAAGAGAAGCAGGAAAAGTTTGTGTTATCGTAGATAT CTTAGATAAAAACTTCGTTATAGTTGATGGGTTAGTTAAGAGAAGAAGATGCAACATAAAACACTTAGAACCAACAGAAA AGAAAGTTGATATCCCAAAAGGAGCTTCAACAGAAGAAGTTAAATTAGCTTTAGATGCTGCAGGATTATTGAAGGAAGAA TAA
Upstream 100 bases:
>100_bases ACTTAAAAAAATAAAAACGAGGGGGCGATATTAAACCTCCCTCATTGGAGGATGAGTTGTGATTCGCGAGAGTCACAACA ACAAAAATGAGGTGAGGTAA
Downstream 100 bases:
>100_bases ATCAATTCTTATTTTCTTCTTTTTTATTTTTATTTTGAAACTATATTTGTAAATTTAAATTTACAAATATAGAAACTTTA AATAACAATTTAAAACAAAA
Product: 50S ribosomal protein L14e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE
Sequences:
>Translated_80_residues MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE >Mature_79_residues PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPKGASTEEVKLALDAAGLLKEE
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L14e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL14E_METJA (P54054)
Other databases:
- EMBL: L77117 - PIR: A64382 - RefSeq: NP_247641.1 - ProteinModelPortal: P54054 - SMR: P54054 - GeneID: 1451523 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0657 - NMPDR: fig|243232.1.peg.678 - TIGR: MJ0657 - HOGENOM: HBG551856 - OMA: HIEPTDK - ProtClustDB: PRK04333 - BioCyc: MJAN243232:MJ_0657-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00721 - InterPro: IPR005824 - InterPro: IPR002784 - InterPro: IPR014722 - Gene3D: G3DSA:2.30.30.30
Pfam domain/function: PF00467 KOW; PF01929 Ribosomal_L14e
EC number: NA
Molecular weight: Translated: 8739; Mature: 8608
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPK CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEECCCC GASTEEVKLALDAAGLLKEE CCCCCEEEEEECCCCCCCCC >Mature Secondary Structure PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHLEPTEKKVDIPK CCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEECCCC GASTEEVKLALDAAGLLKEE CCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087