Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is pfdA2
Identifier: 15668829
GI number: 15668829
Start: 575437
End: 575880
Strand: Reverse
Name: pfdA2
Synonym: MJ0648
Alternate gene names: 15668829
Gene position: 575880-575437 (Counterclockwise)
Preceding gene: 15668832
Following gene: 15668828
Centisome position: 34.59
GC content: 34.68
Gene sequence:
>444_bases ATGGTAAATGAAGTCATAGACATAAATGAAGCAGTTAGAGCATACATAGCTCAAATTGAAGGTTTGAGAGCTGAAATTGG AAGATTAGACGCAACAATAGCAACATTGAGACAGTCATTAGCAACATTAAAGAGCTTAAAAACATTGGGAGAGGGGAAAA CTGTCTTAGTTCCTGTTGGAAGTATTGCTCAAGTAGAGATGAAAGTTGAAAAGATGGATAAGGTTGTTGTTTCAGTTGGA CAGAATATTTCAGCTGAGTTAGAGTATGAGGAGGCATTGAAATACATTGAAGATGAAATTAAAAAGCTATTGACATTCAG ATTAGTCTTAGAGCAAGCAATTGCCGAATTGTATGCAAAAATAGAGGATTTAATTGCAGAAGCTCAACAAACATCTGAAG AAGAAAAAGCAGAAGAGGAAGAAAATGAAGAAAAAGCTGAATAA
Upstream 100 bases:
>100_bases CTTCTAACTAATACAATAATTGTGAAATAAATTTCTAATATATTACTAAAAATAACTTAAAAATAGAATAAGATTATTAA ATAATAAAAGAGGGGATAGT
Downstream 100 bases:
>100_bases TGAGTTTCAAGAAGTAATTGACTTCTTGAAATCTCTTCCAGAGGGGAGGAGAGTATATATTGAGATGTCTGGCATCTGGA TAGAGGTTACTAAGGAAGAG
Product: prefoldin subunit alpha
Products: NA
Alternate protein names: GimC subunit alpha 2
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVNEVIDINEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVG QNISAELEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAKIEDLIAEAQQTSEEEKAEEEENEEKAE
Sequences:
>Translated_147_residues MVNEVIDINEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVG QNISAELEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAKIEDLIAEAQQTSEEEKAEEEENEEKAE >Mature_147_residues MVNEVIDINEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVG QNISAELEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAKIEDLIAEAQQTSEEEKAEEEENEEKAE
Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding
COG id: COG1730
COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prefoldin subunit alpha family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PFDA2_METJA (Q58064)
Other databases:
- EMBL: L77117 - PIR: H64380 - RefSeq: NP_247632.1 - ProteinModelPortal: Q58064 - SMR: Q58064 - GeneID: 1451514 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0648 - NMPDR: fig|243232.1.peg.669 - TIGR: MJ0648 - HOGENOM: HBG509190 - OMA: TIATLRQ - ProtClustDB: PRK03947 - BioCyc: MJAN243232:MJ_0648-MONOMER - HAMAP: MF_00308 - InterPro: IPR011599 - InterPro: IPR009053 - InterPro: IPR004127 - TIGRFAMs: TIGR00293
Pfam domain/function: PF02996 Prefoldin; SSF46579 Prefoldin
EC number: NA
Molecular weight: Translated: 16394; Mature: 16394
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNEVIDINEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SIAQVEMKVEKMDKVVVSVGQNISAELEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAK CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEDLIAEAQQTSEEEKAEEEENEEKAE HHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVNEVIDINEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SIAQVEMKVEKMDKVVVSVGQNISAELEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAK CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEDLIAEAQQTSEEEKAEEEENEEKAE HHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087