Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is pgk

Identifier: 15668822

GI number: 15668822

Start: 570032

End: 571285

Strand: Reverse

Name: pgk

Synonym: MJ0641

Alternate gene names: 15668822

Gene position: 571285-570032 (Counterclockwise)

Preceding gene: 15668828

Following gene: 15668821

Centisome position: 34.31

GC content: 34.45

Gene sequence:

>1254_bases
ATGATTATGTTTTTGACGTTGGATGACTTTAATTTTGAAGATAAGAGGGTAGTTTTGAGAGTAGATATAAACTGTCCAAT
AGACCCAAACACTGGAGAGATTTTAGATGATAAGAGGATTAGAGAAATAAAAAGCACAATTACAGAGCTTATAAACAAAG
GTGCTAAGGTTGTTATCTTAGCTCACCAAAGTAGGCCAGGGAAGAAAGATTTTACTACATTAAAAAACCATGCAAAGGTT
TTATCAGATGTTATTGGTAAAGAAGTAGAGTATATTGATGAAGTTATAGGCTCTACAGCAAGAGAGGCAATAATCAATAT
GAAATGTGGAGATGTCATTTTATTGGAGAATGTTAGGTTTTATTCTGAGGAGGTTTTAAGTGATTGGAAAAAATGGGAAA
ATATAACTCCAAAAAAACAGGCAGAGACAAATTTAATTAAAAGATTAGCCCCATTATTTGACTATTTTGTTAATGATGCC
TTTGCAGCTGCACACAGGGCTCAGCCATCATTAGTTGGTTTCTCTTACTATATGCCAATGATTGCTGGAAGATTGATGGA
GAGAGAGGTTGGGGTTTTATCAAAGGTTTTAGAAAATCCAGAAAAGCCCTGTGTTTATGTTTTGGGAGGAGCTAAGGCAG
ATGATTCAATAAGAGTTATGAAAAACGTCTTAGAAAATGGAACTGCTGATAAGGTTTTAACTTCAGGAATTGTTGCTAAC
ATCTTCCTTGTAGCTATGGGATATGATTTAGGCGTAAATATGGATATTATTGAAAATCTTGGATTAAAAAGCCAAATAGA
GATTGCTAAAGAGTTGTTAAATAAATTTGAAGATAAAATCGTTGTCCCTGTTGATGTAGCCCTAAATATTAATGAAGAGA
GGGTTGAAGCTGATTTAAATAAGGATGAAAAAGTAGAACATTTAATTAATGATATTGGGGAGAAAACTATCGAACTTTAC
AGTGAAATAATTAATGAAGCAAAAACCATTGTTGCCAATGGTCCAGCGGGAGTGTTTGAAAAAGAGGCATTTGCAAAAGG
AACTGAAGAGCTGTTGAAAGCGATAGCTAACTCAAAAGGGTTTTCAGTTATTGGAGGAGGGCATTTATCTGCAGCTGCTG
AATTATTTGGAATTGCTGATAAGATTGACCATGTTAGTACGGGAGGTGGAGCAACCTTAGATTTCTTAGCTGGAGAAAAA
TTGCCAGTAATAGAGATGCTTAAGGAATCATATAAGAAATATAAGGGACAATAA

Upstream 100 bases:

>100_bases
CTTAAAAACTTTAAAATGATAATTAGGAAATATCTAAGAAAAGTTTCTACAAATGACGATAATCTATTAAAACTTCTAAA
AACATAAAAATCTTAGAGGG

Downstream 100 bases:

>100_bases
ATAGTAAATTAATTTAATTTTTAATTTTAATATTCTACTAGTTTTTTCTATTGTTGAGTTTAAATTGGAAATATGTGAAA
TAAGAACAAATCGAAAGTTT

Product: phosphoglycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV
LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA
FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN
IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY
SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK
LPVIEMLKESYKKYKGQ

Sequences:

>Translated_417_residues
MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV
LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA
FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN
IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY
SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK
LPVIEMLKESYKKYKGQ
>Mature_417_residues
MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV
LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA
FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN
IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY
SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK
LPVIEMLKESYKKYKGQ

Specific function: Second phase of glycolysis; second step. [C]

COG id: COG0126

COG function: function code G; 3-phosphoglycerate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate kinase family

Homologues:

Organism=Homo sapiens, GI4505763, Length=422, Percent_Identity=36.2559241706161, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI31543397, Length=422, Percent_Identity=35.781990521327, Blast_Score=211, Evalue=8e-55,
Organism=Escherichia coli, GI1789294, Length=416, Percent_Identity=36.2980769230769, Blast_Score=219, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17508823, Length=422, Percent_Identity=36.7298578199052, Blast_Score=221, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6319857, Length=422, Percent_Identity=34.5971563981043, Blast_Score=210, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24581203, Length=425, Percent_Identity=36.4705882352941, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17136394, Length=427, Percent_Identity=33.9578454332553, Blast_Score=191, Evalue=1e-48,

Paralogues:

None

Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): PGK_METJA (Q58058)

Other databases:

- EMBL:   L77117
- PIR:   A64380
- RefSeq:   NP_247625.1
- ProteinModelPortal:   Q58058
- SMR:   Q58058
- GeneID:   1451507
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0641
- NMPDR:   fig|243232.1.peg.662
- TIGR:   MJ0641
- HOGENOM:   HBG453500
- OMA:   PGKKDFT
- ProtClustDB:   PRK00073
- BioCyc:   MJAN243232:MJ_0641-MONOMER
- BRENDA:   2.7.2.3
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_00145
- InterPro:   IPR001576
- InterPro:   IPR015901
- InterPro:   IPR015911
- InterPro:   IPR015824
- Gene3D:   G3DSA:3.40.50.1270
- Gene3D:   G3DSA:3.40.50.1260
- PANTHER:   PTHR11406
- PIRSF:   PIRSF000724
- PRINTS:   PR00477

Pfam domain/function: PF00162 PGK; SSF53748 PGK

EC number: =2.7.2.3

Molecular weight: Translated: 46134; Mature: 46134

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00111 PGLYCERATE_KINASE

Important sites: BINDING 39-39 BINDING 119-119 BINDING 166-166 BINDING 340-340

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVIL
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
AHQSRPGKKDFTTLKNHAKVLSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHH
YSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDAFAAAHRAQPSLVGFSYYMPM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLN
HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCC
KDEKVEHLINDIGEKTIELYSEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCC
FSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEKLPVIEMLKESYKKYKGQ
CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVIL
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
AHQSRPGKKDFTTLKNHAKVLSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHH
YSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDAFAAAHRAQPSLVGFSYYMPM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLN
HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCC
KDEKVEHLINDIGEKTIELYSEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCC
FSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEKLPVIEMLKESYKKYKGQ
CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087