Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is pgk
Identifier: 15668822
GI number: 15668822
Start: 570032
End: 571285
Strand: Reverse
Name: pgk
Synonym: MJ0641
Alternate gene names: 15668822
Gene position: 571285-570032 (Counterclockwise)
Preceding gene: 15668828
Following gene: 15668821
Centisome position: 34.31
GC content: 34.45
Gene sequence:
>1254_bases ATGATTATGTTTTTGACGTTGGATGACTTTAATTTTGAAGATAAGAGGGTAGTTTTGAGAGTAGATATAAACTGTCCAAT AGACCCAAACACTGGAGAGATTTTAGATGATAAGAGGATTAGAGAAATAAAAAGCACAATTACAGAGCTTATAAACAAAG GTGCTAAGGTTGTTATCTTAGCTCACCAAAGTAGGCCAGGGAAGAAAGATTTTACTACATTAAAAAACCATGCAAAGGTT TTATCAGATGTTATTGGTAAAGAAGTAGAGTATATTGATGAAGTTATAGGCTCTACAGCAAGAGAGGCAATAATCAATAT GAAATGTGGAGATGTCATTTTATTGGAGAATGTTAGGTTTTATTCTGAGGAGGTTTTAAGTGATTGGAAAAAATGGGAAA ATATAACTCCAAAAAAACAGGCAGAGACAAATTTAATTAAAAGATTAGCCCCATTATTTGACTATTTTGTTAATGATGCC TTTGCAGCTGCACACAGGGCTCAGCCATCATTAGTTGGTTTCTCTTACTATATGCCAATGATTGCTGGAAGATTGATGGA GAGAGAGGTTGGGGTTTTATCAAAGGTTTTAGAAAATCCAGAAAAGCCCTGTGTTTATGTTTTGGGAGGAGCTAAGGCAG ATGATTCAATAAGAGTTATGAAAAACGTCTTAGAAAATGGAACTGCTGATAAGGTTTTAACTTCAGGAATTGTTGCTAAC ATCTTCCTTGTAGCTATGGGATATGATTTAGGCGTAAATATGGATATTATTGAAAATCTTGGATTAAAAAGCCAAATAGA GATTGCTAAAGAGTTGTTAAATAAATTTGAAGATAAAATCGTTGTCCCTGTTGATGTAGCCCTAAATATTAATGAAGAGA GGGTTGAAGCTGATTTAAATAAGGATGAAAAAGTAGAACATTTAATTAATGATATTGGGGAGAAAACTATCGAACTTTAC AGTGAAATAATTAATGAAGCAAAAACCATTGTTGCCAATGGTCCAGCGGGAGTGTTTGAAAAAGAGGCATTTGCAAAAGG AACTGAAGAGCTGTTGAAAGCGATAGCTAACTCAAAAGGGTTTTCAGTTATTGGAGGAGGGCATTTATCTGCAGCTGCTG AATTATTTGGAATTGCTGATAAGATTGACCATGTTAGTACGGGAGGTGGAGCAACCTTAGATTTCTTAGCTGGAGAAAAA TTGCCAGTAATAGAGATGCTTAAGGAATCATATAAGAAATATAAGGGACAATAA
Upstream 100 bases:
>100_bases CTTAAAAACTTTAAAATGATAATTAGGAAATATCTAAGAAAAGTTTCTACAAATGACGATAATCTATTAAAACTTCTAAA AACATAAAAATCTTAGAGGG
Downstream 100 bases:
>100_bases ATAGTAAATTAATTTAATTTTTAATTTTAATATTCTACTAGTTTTTTCTATTGTTGAGTTTAAATTGGAAATATGTGAAA TAAGAACAAATCGAAAGTTT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK LPVIEMLKESYKKYKGQ
Sequences:
>Translated_417_residues MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK LPVIEMLKESYKKYKGQ >Mature_417_residues MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVILAHQSRPGKKDFTTLKNHAKV LSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRFYSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDA FAAAHRAQPSLVGFSYYMPMIAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLNKDEKVEHLINDIGEKTIELY SEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKGFSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEK LPVIEMLKESYKKYKGQ
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=422, Percent_Identity=36.2559241706161, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI31543397, Length=422, Percent_Identity=35.781990521327, Blast_Score=211, Evalue=8e-55, Organism=Escherichia coli, GI1789294, Length=416, Percent_Identity=36.2980769230769, Blast_Score=219, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17508823, Length=422, Percent_Identity=36.7298578199052, Blast_Score=221, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6319857, Length=422, Percent_Identity=34.5971563981043, Blast_Score=210, Evalue=3e-55, Organism=Drosophila melanogaster, GI24581203, Length=425, Percent_Identity=36.4705882352941, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136394, Length=427, Percent_Identity=33.9578454332553, Blast_Score=191, Evalue=1e-48,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_METJA (Q58058)
Other databases:
- EMBL: L77117 - PIR: A64380 - RefSeq: NP_247625.1 - ProteinModelPortal: Q58058 - SMR: Q58058 - GeneID: 1451507 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0641 - NMPDR: fig|243232.1.peg.662 - TIGR: MJ0641 - HOGENOM: HBG453500 - OMA: PGKKDFT - ProtClustDB: PRK00073 - BioCyc: MJAN243232:MJ_0641-MONOMER - BRENDA: 2.7.2.3 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 46134; Mature: 46134
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 39-39 BINDING 119-119 BINDING 166-166 BINDING 340-340
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVIL CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE AHQSRPGKKDFTTLKNHAKVLSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRF EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHH YSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDAFAAAHRAQPSLVGFSYYMPM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLN HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCC KDEKVEHLINDIGEKTIELYSEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCC FSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEKLPVIEMLKESYKKYKGQ CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MIMFLTLDDFNFEDKRVVLRVDINCPIDPNTGEILDDKRIREIKSTITELINKGAKVVIL CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE AHQSRPGKKDFTTLKNHAKVLSDVIGKEVEYIDEVIGSTAREAIINMKCGDVILLENVRF EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCHH YSEEVLSDWKKWENITPKKQAETNLIKRLAPLFDYFVNDAFAAAHRAQPSLVGFSYYMPM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAGRLMEREVGVLSKVLENPEKPCVYVLGGAKADDSIRVMKNVLENGTADKVLTSGIVAN HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH IFLVAMGYDLGVNMDIIENLGLKSQIEIAKELLNKFEDKIVVPVDVALNINEERVEADLN HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCC KDEKVEHLINDIGEKTIELYSEIINEAKTIVANGPAGVFEKEAFAKGTEELLKAIANSKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCC FSVIGGGHLSAAAELFGIADKIDHVSTGGGATLDFLAGEKLPVIEMLKESYKKYKGQ CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087