Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is yjeK [C]
Identifier: 15668815
GI number: 15668815
Start: 562705
End: 564567
Strand: Direct
Name: yjeK [C]
Synonym: MJ0634
Alternate gene names: 15668815
Gene position: 562705-564567 (Clockwise)
Preceding gene: 15668814
Following gene: 15668816
Centisome position: 33.8
GC content: 33.92
Gene sequence:
>1863_bases ATGACAATAAAATCCATGACTGAGTATGAAACCATTAGTTATAAAACATTTTTGGACATATTTTCTCCACTTCCAGAGAT TGGAGAAATTTTGGAAGAGAGTGAGAGTGTAGAAGAAGCGAGAGAGAAATTATTTGAATTTTGTAAAGAATTAGAGTGGG AAATTAGAATGGGAAGAATAAAGTTTGATAATGAAGTTGATAGATGGTTGGCTTTAAAGGCAATTGAAGTATTTTTAAAC ATAATATCCAAAGATAATGAGAGATTGGCAGGTTTCAGCACATTAGAATATTTATGGAAAGCATATAAGGGAGATGAAGA GGCTTTAAAAGAAATTAGGGAGGGGTTTATTGAAGAATTTAGACATTTATTCTTAGCAATGTCTGGAAAGGCAGATTATT CATTAGGGTTTTTAGGGAAGAGATTATTAGAAGAAGGAGTTAAATTTATTGATTTCAGCAAAATAAAAGGTAGAGAGGCA GGGATAGCGAGGTCTAATTTCTTAGACAAGGTTTATGAAATTATGAGGGAGTATATAAGCAGATATCCAAGTGGGTTAGA TAAGAGAATTATCTTAAAGAGAAAAAAGAATAGAGAGATTTTAGAGGAATTTTTTGGAATAACTGACGAAGAGTGGTTTA ATTACAAATGGCAATTTAAGAATGTATTGAGAGGTTTAAAAGGCGTTAAGATATTGAGAGAGTTAAGAGAGGTGACAAAC TTTAAAATATCAGATGAAGATTTAGAGATTATTGAAAAAGCTGTAAAGAATGGCATACCATTTGGATTAACCCCTTATTA TCTCCACTTATTTGACTTTGAAAACCCTTACGTTGAGGATTTGGCAGTTAGAAGGCAGGTTATTCCACCAGAGTGGTATG TTGAAAAGATGATTGAGCATAAAGAAGATAGGAACATAGCATTTGACTTCATGGGAGAGCATGACACTTCTCCAATAGAT TTAGTAACAAGGAGATATGTAACTATAGCAATCATTAAGCCTTATGAATCCTGCCCACAGATTTGTGTCTATTGTCAAAG AAACTGGATGGTGCAAGATTTTGATGCTAAGGCGTTCCCAGGATGGGAGAAGGTTGAGAAAGCTTTAGATTGGTTTGCTG AACACGATTCAATGATTGAAATCTTAATTACAGGAGGAGACCCATTCAGCTTAAGCGATAAAGCTATCGAAAAAATGCTA AATAGAATAGCTGAGATGAACCACGTTGTAGGAGTTAGATTTGGAACAAGAACAATAGTAACTGCCCCAATGAGAATAAC GGATGAATTAGCTGAGTTATTAGGAAGTTTTGAAAAGAGTTTGATGATTTCAACACATGTAGAGAGTTGTTATGAGATAA CTCCAGAAGTTGCTGAGGCTGTTAAAAAGTTGAGAACAAATAATATCTACATCTATAATCAACATGTATTCCACAGATAT GTAAGTAGGAGATTTGAAAACGTAGCTTTAAGAATTGCTTTAAAGAAGGTTGGAATTATTCCTTACTATACTTTTTATCC AAAAGGGAAGATGGAACATAAAGATTACTTGGTTCCAATAGCAAGATTAGCTCAGGAAGTTAAAGAGGAAGCAAGATTGC TTCCAGGTTCATTTAGAACAGATGAGCCAATATTCAACGTCCCAAGAATGGGGAAAAATCACTTGAGAGCATGGCAGGAT AGAGAGTTAATAGCTATAAAGCCAAATGGAAGTAGGGTTTATTTAATGCATCCATGGGAGAAGGGGATATATCCAACTAA ACTCTACACATATGAAGATGTTCCAATTAAGGAATACTTAGACAGTTTAAAAGAGATTGGAGAAAACATTGAGGAGTATA AAACAATATGGTATTATTATTAA
Upstream 100 bases:
>100_bases AATTTTCGATGAAATTCTAACAAAAAAAGTTTATGAAGATGTTTGGAGGTCGTTAATAGAATATCAAATTATTTAAATTA AATGGTGTAGAGGTGATATT
Downstream 100 bases:
>100_bases ACTTTCTACTTTTTTTATTCTAATTTATTTTATCTAATTTTTATCAATTGCGCACTCTTTTTTATTTATATTATTGTATT TATATAGTTAAATAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MTIKSMTEYETISYKTFLDIFSPLPEIGEILEESESVEEAREKLFEFCKELEWEIRMGRIKFDNEVDRWLALKAIEVFLN IISKDNERLAGFSTLEYLWKAYKGDEEALKEIREGFIEEFRHLFLAMSGKADYSLGFLGKRLLEEGVKFIDFSKIKGREA GIARSNFLDKVYEIMREYISRYPSGLDKRIILKRKKNREILEEFFGITDEEWFNYKWQFKNVLRGLKGVKILRELREVTN FKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPID LVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIEKML NRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRY VSRRFENVALRIALKKVGIIPYYTFYPKGKMEHKDYLVPIARLAQEVKEEARLLPGSFRTDEPIFNVPRMGKNHLRAWQD RELIAIKPNGSRVYLMHPWEKGIYPTKLYTYEDVPIKEYLDSLKEIGENIEEYKTIWYYY
Sequences:
>Translated_620_residues MTIKSMTEYETISYKTFLDIFSPLPEIGEILEESESVEEAREKLFEFCKELEWEIRMGRIKFDNEVDRWLALKAIEVFLN IISKDNERLAGFSTLEYLWKAYKGDEEALKEIREGFIEEFRHLFLAMSGKADYSLGFLGKRLLEEGVKFIDFSKIKGREA GIARSNFLDKVYEIMREYISRYPSGLDKRIILKRKKNREILEEFFGITDEEWFNYKWQFKNVLRGLKGVKILRELREVTN FKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPID LVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIEKML NRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRY VSRRFENVALRIALKKVGIIPYYTFYPKGKMEHKDYLVPIARLAQEVKEEARLLPGSFRTDEPIFNVPRMGKNHLRAWQD RELIAIKPNGSRVYLMHPWEKGIYPTKLYTYEDVPIKEYLDSLKEIGENIEEYKTIWYYY >Mature_619_residues TIKSMTEYETISYKTFLDIFSPLPEIGEILEESESVEEAREKLFEFCKELEWEIRMGRIKFDNEVDRWLALKAIEVFLNI ISKDNERLAGFSTLEYLWKAYKGDEEALKEIREGFIEEFRHLFLAMSGKADYSLGFLGKRLLEEGVKFIDFSKIKGREAG IARSNFLDKVYEIMREYISRYPSGLDKRIILKRKKNREILEEFFGITDEEWFNYKWQFKNVLRGLKGVKILRELREVTNF KISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDL VTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIEKMLN RIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRYV SRRFENVALRIALKKVGIIPYYTFYPKGKMEHKDYLVPIARLAQEVKEEARLLPGSFRTDEPIFNVPRMGKNHLRAWQDR ELIAIKPNGSRVYLMHPWEKGIYPTKLYTYEDVPIKEYLDSLKEIGENIEEYKTIWYYY
Specific function: Unknown
COG id: COG1509
COG function: function code E; Lysine 2,3-aminomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KamA family
Homologues:
Organism=Escherichia coli, GI1790589, Length=180, Percent_Identity=26.1111111111111, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y634_METJA (Q58051)
Other databases:
- EMBL: L77117 - PIR: B64379 - RefSeq: NP_247618.1 - ProteinModelPortal: Q58051 - SMR: Q58051 - GeneID: 1451500 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0634 - NMPDR: fig|243232.1.peg.655 - TIGR: MJ0634 - HOGENOM: HBG454161 - OMA: FLAMSGK - ProtClustDB: CLSK876273 - BioCyc: MJAN243232:MJ_0634-MONOMER - InterPro: IPR003739 - InterPro: IPR006638 - InterPro: IPR007197 - SMART: SM00729 - TIGRFAMs: TIGR00238
Pfam domain/function: PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 73372; Mature: 73241
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKSMTEYETISYKTFLDIFSPLPEIGEILEESESVEEAREKLFEFCKELEWEIRMGRI CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECEE KFDNEVDRWLALKAIEVFLNIISKDNERLAGFSTLEYLWKAYKGDEEALKEIREGFIEEF EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RHLFLAMSGKADYSLGFLGKRLLEEGVKFIDFSKIKGREAGIARSNFLDKVYEIMREYIS HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RYPSGLDKRIILKRKKNREILEEFFGITDEEWFNYKWQFKNVLRGLKGVKILRELREVTN HCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEH CCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHC KEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFP CCCCCEEEEECCCCCCCHHHHHHHCEEEEEEECCCHHHHHHHHHHHCCCEEECCCCCCCC GWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIEKMLNRIAEMNHVVGVRFGTRTIV CHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEE TAPMRITDELAELLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRY ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHH VSRRFENVALRIALKKVGIIPYYTFYPKGKMEHKDYLVPIARLAQEVKEEARLLPGSFRT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DEPIFNVPRMGKNHLRAWQDRELIAIKPNGSRVYLMHPWEKGIYPTKLYTYEDVPIKEYL CCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEECCHHCCCCCCEEEEECCCCHHHHH DSLKEIGENIEEYKTIWYYY HHHHHHHCCHHHHHEEEEEC >Mature Secondary Structure TIKSMTEYETISYKTFLDIFSPLPEIGEILEESESVEEAREKLFEFCKELEWEIRMGRI CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECEE KFDNEVDRWLALKAIEVFLNIISKDNERLAGFSTLEYLWKAYKGDEEALKEIREGFIEEF EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RHLFLAMSGKADYSLGFLGKRLLEEGVKFIDFSKIKGREAGIARSNFLDKVYEIMREYIS HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RYPSGLDKRIILKRKKNREILEEFFGITDEEWFNYKWQFKNVLRGLKGVKILRELREVTN HCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEH CCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHC KEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFP CCCCCEEEEECCCCCCCHHHHHHHCEEEEEEECCCHHHHHHHHHHHCCCEEECCCCCCCC GWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAIEKMLNRIAEMNHVVGVRFGTRTIV CHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEE TAPMRITDELAELLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRY ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHH VSRRFENVALRIALKKVGIIPYYTFYPKGKMEHKDYLVPIARLAQEVKEEARLLPGSFRT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DEPIFNVPRMGKNHLRAWQDRELIAIKPNGSRVYLMHPWEKGIYPTKLYTYEDVPIKEYL CCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEECCHHCCCCCCEEEEECCCCHHHHH DSLKEIGENIEEYKTIWYYY HHHHHHHCCHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087